.gitignore

@@ -2,4 +2,6 @@
 index.html
 index_files/
 .jupyter_cache
-public/
+public/
\ No newline at end of file
+/.quarto/
+/summary.qmd

.gitlab-ci.yml

@@ -3,7 +3,7 @@ variables:
   BASENAME: index # name of main .qmd file
 
 before_script:
-  - python -V  # Print out python version for debugging
+  - python3 -V  # Print out python version for debugging
 
 pages:
   tags: 
@@ -15,10 +15,9 @@ pages:
   script:
     - wget "https://github.com/quarto-dev/quarto-cli/releases/download/v${QUARTO_VERSION}/quarto-${QUARTO_VERSION}-linux-amd64.deb"
     - dpkg -i quarto-${QUARTO_VERSION}-linux-amd64.deb
-    - pip install jupyter
+    - python3 -m pip install -r requirements.txt
     - quarto check install
     - quarto check jupyter
-    - pip install -r requirements.txt
     - ./make_presentations
   artifacts:
     paths:

_quarto.yml

+project:
+  type: website
+  pre-render: scripts/prepare.py
+  output-dir: public
+
+
+website:
+  title: "Generic Software Skills"
+  navbar:
+    left:
+      - href: index.qmd
+        text: Home
+      - summary.qmd
+  sidebar:
+    search: true
+    contents:
+      - section: "Lectures"
+        contents: "lectures/*/index.qmd"
+
+
+format:
+  html:
+    theme: cosmo
+    css: styles.css
+    toc: true

environment.yaml

+name: software-skills
+channels:
+  - conda-forge
+dependencies:
+  - python=3.12
+  - quarto
+  - pip
+  - pip:
+    - -r requirements.txt

index.qmd

+---
+title: "Generic Software Skills"
+---

lectures/_metadata.yml

+format:
+  revealjs:
+    transition: slide
+    slide-number: true
+    code-background: true
+    logo: ../../static/logos.png
+    footer: "Generic software Skills"
+    theme: [default, custom.scss]
+    chalkboard:
+      buttons: true
+    navigation-mode: linear
+    auto-stretch: true
+    center: true
+    mermaid:
+      theme: default
+
+jupyter: python3
+execute:
+  cache: true

example-lecture/index.qmd → lectures/example-lecture/index.qmd

 ---
 title: "Example lecture"
 author: "Tobias Kölling, Florian Ziemen, and the teams at MPI-M and DKRZ"
-
-format:
-  revealjs:
-    transition: slide
-    slide-number: true
-    code-background: true
-    logo: static/logos.png
-    footer: "Generic software Skills"
-    theme: [default, custom.scss]
-    chalkboard:
-      buttons: true
-    navigation-mode: linear
-    auto-stretch: true
-    center: true
-    mermaid:
-      theme: default
-
-jupyter: python3
-execute:
-  cache: true
 ---
 
 # Preface

make_presentations

 #!/bin/bash
 
-
-for filename in */index.qmd ; do 
-    folder=$(dirname "${filename}")
-    quarto render "${filename}"
-
-    outdir=public/"${folder}"
-    mkdir -p "${outdir}"
-
-    cp "${filename/.qmd/.html}" "${outdir}"
-    cp -R ${filename/.qmd/}_files "${outdir}"
-    cp -R ${folder}/static ${outdir}/
-
-done
+quarto render

requirements.txt

+jupyter
 jupyter-cache
 intake
 xarray

scripts/prepare.py

+import glob
+import logging
+logging.basicConfig()
+logging.getLogger().setLevel(logging.DEBUG)
+
+# But you can use your content.
+
+def parse_file(filename):
+    logging.debug(f'opening {filename}')
+    with open(filename) as f:
+        lines = f.readlines()
+        titles = [ f"# {x[6:].strip()[1:-1]}\n" for x in lines if x.startswith("title:")]
+        entries = titles + [ f"#{x}" for x in lines if x[0] == "#" ]
+        entries = [ f'* {x[4:]}' if x[:4]=="###" else x  for x in entries ]
+    return entries
+
+summery_header = """---
+title: "Lecture Overview"
+---
+"""
+
+def generate_summary():
+    files = glob.glob("lectures/*/index.qmd")
+
+    all_entries = [ ]
+    for x in files:
+        all_entries.extend(parse_file(x))
+
+    with open("summary.qmd", "w") as outfile:
+        outfile.write(summery_header)
+        outfile.writelines(all_entries)
+
+
+def main():
+    generate_summary()
+
+if __name__ == "__main__":
+    exit(main())

styles.css

+/* css styles */