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Fixes for the build system

Merged Fixes for the build system
m300488/distcheck into develop
Merged Sergey Kosukhin requested to merge m300488/distcheck into develop
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.ci/bb/breeze-mpim/init.sh
+ 46
− 174
@@ -6,26 +6,7 @@
#
init_env ()
{
case $(lsb_release -sc) in
stretch)
module unload automake/1.16.1
switch_for_module automake/1.16.1
# Use non-Debian libtool by default:
LIBTOOL_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/libtool-2.4.6-qdyaqqw'
export PATH="${LIBTOOL_ROOT}/bin:${PATH-}"
export ACLOCAL_PATH="${LIBTOOL_ROOT}/share/aclocal:${ACLOCAL_PATH-}"
SWIG_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/swig-4.0.2-busrrtn'
RUBY_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/ruby-3.0.2-stqm2vj'
PYTHON_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/python-2.7.18-zqrnwom'
export PATH="${RUBY_ROOT}/bin:${PYTHON_ROOT}/bin:${SWIG_ROOT}/bin:${PATH}"
;;
bullseye)
switch_for_module automake autoconf libtool swig ruby python
;;
esac
switch_for_module automake autoconf libtool swig ruby python
}
#
@@ -35,18 +16,9 @@ init_debian_libtool ()
export PATH="/usr/bin:${PATH-}"
export ACLOCAL_PATH="/usr/share/aclocal:${ACLOCAL_PATH-}"
case $(lsb_release -sc) in
stretch)
automake_module='automake/1.16.1'
;;
bullseye)
automake_module='automake'
;;
esac
# Prepend ACLOCAL_PATH with the path to Automake:
module unload "${automake_module}"
switch_for_module "${automake_module}"
module unload automake
switch_for_module automake
}
#
@@ -56,43 +28,23 @@ init_gcc ()
{
init_env
case $(lsb_release -sc) in
stretch)
switch_for_module gcc/6.3.0
ECCODES_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/eccodes-2.21.0-3sdngaq'
NETCDF_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/netcdf-c-4.8.0-fzupaca'
# The installation of ecCodes does not provide '*.la' files, which would
# trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${LD_LIBRARY_PATH-}"
# The installation of NetCDF library provides '*.la' files, which trigger
# the linking to the HDF5 library but its installation does not provide
# the '*.la' files, which would trigger the RPATH injection:
HDF5_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/hdf5-1.10.7-4l3frcp'
export LD_LIBRARY_PATH="${HDF5_ROOT}/lib:${LD_LIBRARY_PATH}"
;;
bullseye)
switch_for_module gcc/12.1.0 mpich/3.4.3-gcc-12.1.0
ECCODES_ROOT='/sw/bullseye-x64/packages/gcc-12.1.0/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/gcc-12.1.0/netcdf-c-4.9.0'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/ppm-1.0.8.1-gcc-12.1.0'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/yaxt-0.9.3.1-gcc-12.1.0'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
MPICC=mpicc
MPIFC=mpif90
MPI_LAUNCH="$(which mpirun)"
;;
esac
switch_for_module gcc/12.1.0 mpich/3.4.3-gcc-12.1.0
CC=gcc
CXX=g++
FC=gfortran
MPICC=mpicc
MPIFC=mpif90
MPI_LAUNCH="$(which mpirun)"
ECCODES_ROOT='/sw/bullseye-x64/packages/gcc-12.1.0/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/gcc-12.1.0/netcdf-c-4.9.0'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/ppm-1.0.8.1-gcc-12.1.0'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/yaxt-0.9.3.1-gcc-12.1.0'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
}
#
@@ -102,50 +54,23 @@ init_nvhpc ()
{
init_env
case $(lsb_release -sc) in
stretch)
switch_for_module gcc/6.3.0
export NVHPC='/data/mpi/sclab/sip/m300488/nvhpc'
export NVLOCALRC="${NVHPC}/Linux_x86_64/21.3/compilers/bin/localrc.60300"
export PATH="${NVHPC}/Linux_x86_64/21.3/compilers/bin:${PATH-}"
export PATH="/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nvhpc-21.3-sandybridge/mpich-3.4.2-sfxulsj/bin:${PATH}"
ECCODES_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/eccodes-2.21.0-3sdngaq'
NETCDF_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nvhpc-21.3-sandybridge/netcdf-c-4.8.0-vjppuov'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nvhpc-21.3-sandybridge/scales-ppm-1.0.7-uy4z72r'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nvhpc-21.3-sandybridge/yaxt-0.9.2.1-lbqqemx'
# The installation of ecCodes does not provide '*.la' files, which would
# trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${LD_LIBRARY_PATH-}"
# The installation of NetCDF library provides '*.la' files, which trigger
# the linking to the HDF5 library but its installation does not provide
# the '*.la' files, which would trigger the RPATH injection:
HDF5_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nvhpc-21.3-sandybridge/hdf5-1.10.7-h7pvthl'
export LD_LIBRARY_PATH="${HDF5_ROOT}/lib:${LD_LIBRARY_PATH}"
;;
bullseye)
switch_for_module nvhpc/22.3 mpich/3.4.3-nvhpc-22.3
ECCODES_ROOT='/sw/bullseye-x64/packages/nvhpc-22.3/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/nvhpc-22.3/netcdf-c-4.9.0'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/ppm-1.0.8.1-nvhpc-22.3'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/yaxt-0.9.3.1-nvhpc-22.3'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
;;
esac
switch_for_module nvhpc/22.3 mpich/3.4.3-nvhpc-22.3
CC=nvc
CXX=nvc++
FC=nvfortran
MPICC=mpicc
MPIFC=mpif90
MPI_LAUNCH="$(which mpirun)"
ECCODES_ROOT='/sw/bullseye-x64/packages/nvhpc-22.3/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/nvhpc-22.3/netcdf-c-4.9.0'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/ppm-1.0.8.1-nvhpc-22.3'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/yaxt-0.9.3.1-nvhpc-22.3'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
}
#
@@ -158,51 +83,23 @@ init_clang ()
init_env
case $(lsb_release -sc) in
stretch)
switch_for_module gcc/6.3.0
export PATH="/data/mpi/sclab/sip/m300488/clang/12.0.1/bin:${PATH}"
# Clang does not inject RPATHs to the standard library in use:
export LD_LIBRARY_PATH="/sw/stretch-x64/gcc/gcc-6.3.0/lib64:${LD_LIBRARY_PATH-}"
export PATH="/data/mpi/sclab/sip/m300488/libcdi-ci-sw/clang-12.0.1-sandybridge/openmpi-4.1.1-6ydagyy/bin:${PATH}"
ECCODES_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/eccodes-2.21.0-3sdngaq'
NETCDF_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/clang-12.0.1-sandybridge/netcdf-c-4.8.0-z6r5guk'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/clang-12.0.1-sandybridge/scales-ppm-1.0.7-5mhatgx'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/clang-12.0.1-sandybridge/yaxt-0.9.2.1-cj2nf5j'
# The installation of ecCodes does not provide '*.la' files, which would
# trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${LD_LIBRARY_PATH-}"
# The installation of NetCDF library provides '*.la' files, which trigger
# the linking to the HDF5 library but its installation does not provide
# the '*.la' files, which would trigger the RPATH injection:
HDF5_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/clang-12.0.1-sandybridge/hdf5-1.10.7-4y54xnh'
export LD_LIBRARY_PATH="${HDF5_ROOT}/lib:${LD_LIBRARY_PATH}"
;;
bullseye)
switch_for_module clang/14.0.6 openmpi/4.1.3-clang-14.0.6
ECCODES_ROOT='/sw/bullseye-x64/packages/clang-14.0.6/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/clang-14.0.6/netcdf-c-4.9.0-openmpi-4.1.3'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/ppm-1.0.8.1-clang-14.0.6'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/yaxt-0.9.3.1-clang-14.0.6'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
;;
esac
switch_for_module clang/14.0.6 openmpi/4.1.3-clang-14.0.6
CC=clang
CXX=clang++
FC=gfortran
MPICC=mpicc
MPIFC=mpif90
MPI_LAUNCH="$(which mpirun) --oversubscribe"
ECCODES_ROOT='/sw/bullseye-x64/packages/clang-14.0.6/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/clang-14.0.6/netcdf-c-4.9.0-openmpi-4.1.3'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/ppm-1.0.8.1-clang-14.0.6'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/yaxt-0.9.3.1-clang-14.0.6'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
}
#
@@ -215,46 +112,21 @@ init_nag ()
init_env
case $(lsb_release -sc) in
stretch)
switch_for_module gcc/6.3.0 nag/6.2
export PATH="/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nag-6.2-sandybridge/mpich-3.4.2-fzsvtw2/bin:${PATH}"
ECCODES_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/gcc-6.3.0-sandybridge/eccodes-2.21.0-3sdngaq'
NETCDF_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nag-6.2-sandybridge/netcdf-c-4.8.0-ogawg3w'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nag-6.2-sandybridge/scales-ppm-1.0.7-5kdlwzv'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nag-6.2-sandybridge/yaxt-0.9.2.1-rhq2ysn'
# The installation of ecCodes does not provide '*.la' files, which would
# trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${LD_LIBRARY_PATH-}"
# The installation of NetCDF library provides '*.la' files, which trigger
# the linking to the HDF5 library but its installation does not provide
# the '*.la' files, which would trigger the RPATH injection:
HDF5_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/nag-6.2-sandybridge/hdf5-1.10.7-pltg3k4'
export LD_LIBRARY_PATH="${HDF5_ROOT}/lib:${LD_LIBRARY_PATH}"
;;
bullseye)
switch_for_module nag/7.1 mpich/3.4.3-nag-7.1
ECCODES_ROOT='/sw/bullseye-x64/packages/nag-7.1/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/nag-7.1/netcdf-c-4.9.0-mpich-3.4.3'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/ppm-1.0.8.1-nag-7.1'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw-bullseye/yaxt-0.9.3.1-nag-7.1'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
;;
esac
switch_for_module nag/7.1 mpich/3.4.3-nag-7.1
CC=gcc
CXX=g++
FC=nagfor
MPICC=mpicc
MPIFC=mpif90
MPI_LAUNCH="$(which mpirun)"
ECCODES_ROOT='/sw/bullseye-x64/packages/nag-7.1/eccodes-2.26.0'
NETCDF_ROOT='/sw/bullseye-x64/packages/nag-7.1/netcdf-c-4.9.0-mpich-3.4.3'
PPM_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/ppm-1.0.8.1-nag-7.1'
YAXT_ROOT='/data/mpi/sclab/sip/m300488/libcdi-ci-sw/yaxt-0.9.3.1-nag-7.1'
# The installations of NetCDF and ecCodes libraries do not provide '*.la'
# files, which would trigger the RPATH injection:
export LD_LIBRARY_PATH="${ECCODES_ROOT}/lib:${NETCDF_ROOT}/lib:${LD_LIBRARY_PATH-}"
}

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