Update CI scripts: run './autogen.sh' if needed.

.ci/bb/breeze-mpim/test.all.nv-21.3.0

@@ -9,7 +9,10 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_nv2130
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 "${top_srcdir}/configure" \
+--disable-maintainer-mode \
 --enable-cf-interface \
 --enable-iso-c-interface \
 --enable-mpi \

.ci/bb/breeze-mpim/utils.sh

-#
-# Initializes the environment modules.
-#
-init_env_mods ()
-{
-  saved_set=$-
-  set +eu
-  . /etc/profile.d/mpim.sh
-  module use /data/mpi/sclab/sip/m300488/nvhpc/modulefiles
-  set -${saved_set}
-}
-
 #
 # Accepts a list of environment modules and loads them witch conflict
 # resolution.
@@ -101,12 +89,25 @@ switch_for_module ()
   done
 }
 
+#
+# Initializes the environment.
+#
+init_env ()
+{
+  saved_set=$-
+  set +eu
+  . /etc/profile.d/mpim.sh
+  module use /data/mpi/sclab/sip/m300488/nvhpc/modulefiles
+  set -${saved_set}
+  switch_for_module automake
+}
+
 #
 # Sets variables for tests with NVHPC 21.3.0.
 #
-init_nv2130()
+init_nv2130 ()
 {
-  init_env_mods
+  init_env
   switch_for_module nvhpc/21.3
 
   # The default environment module of NVHPC sets variables, which we do not

.ci/bb/daint-cscs/test.all.cray-11.0.0

@@ -9,6 +9,8 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_cray1100
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 # The configure script does not check the 'lib64' subdirectory, therefore we
 # run it with '--with-eccodes' and the following flags. Note that fixing this
 # in the configure script might be tricky: the 'lib64' subdirectory should be
@@ -20,6 +22,7 @@ CPPFLAGS="-I${ECCODES_ROOT}/include"
 LDFLAGS="-L${ECCODES_ROOT}/lib64"
 
 "${top_srcdir}/configure" \
+--disable-maintainer-mode \
 --enable-cf-interface \
 --enable-iso-c-interface \
 --enable-mpi \

.ci/bb/daint-cscs/test.all.pgi-20.1.1

@@ -9,6 +9,8 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_pgi2011
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 # The configure script does not check the 'lib64' subdirectory, therefore we
 # run it with '--with-eccodes' and the following flags. Note that fixing this
 # in the configure script might be tricky: the 'lib64' subdirectory should be
@@ -20,6 +22,7 @@ CPPFLAGS="-I${ECCODES_ROOT}/include"
 LDFLAGS="-L${ECCODES_ROOT}/lib64"
 
 "${top_srcdir}/configure" \
+--disable-maintainer-mode \
 --enable-cf-interface \
 --enable-iso-c-interface \
 --enable-mpi \

.ci/bb/daint-cscs/utils.sh

-#
-# Initializes the environment modules.
-#
-init_env_mods ()
-{
-  :
-}
-
 #
 # Accepts a list of environment modules and loads them witch conflict
 # resolution.
@@ -97,12 +89,20 @@ switch_for_module ()
   done
 }
 
+#
+# Initializes the environment.
+#
+init_env ()
+{
+  :
+}
+
 #
 # Sets variables for tests with Cray 11.0.0.
 #
-init_cray1100()
+init_cray1100 ()
 {
-  init_env_mods
+  init_env
   switch_for_module craype PrgEnv-cray cce/11.0.0 cray-mpich cray-netcdf
 
   CC=cc
@@ -122,9 +122,9 @@ init_cray1100()
 #
 # Sets variables for tests with PGI 20.1.1.
 #
-init_pgi2011()
+init_pgi2011 ()
 {
-  init_env_mods
+  init_env
   switch_for_module craype PrgEnv-pgi pgi/20.1.1 cray-mpich cray-netcdf
 
   CC=cc

.ci/bb/mistral-dkrz/test.all.gcc-6.4.0

@@ -9,7 +9,10 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_gcc640
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 "${top_srcdir}/configure" \
+--disable-maintainer-mode \
 --enable-cf-interface \
 --enable-iso-c-interface \
 --enable-mpi \

.ci/bb/mistral-dkrz/test.all.intel-17.0.6

@@ -9,7 +9,10 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_intel1706
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 "${top_srcdir}/configure" \
+--disable-maintainer-mode \
 --enable-cf-interface \
 --enable-iso-c-interface \
 --enable-mpi \

.ci/bb/mistral-dkrz/test.all.nag-6.2.6223

@@ -9,6 +9,8 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_nag626223
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 # Use GCC from the path when compiling/linking Fortran code:
 FCFLAGS="-Wc=$(which gcc)"
 
@@ -16,6 +18,7 @@ FCFLAGS="-Wc=$(which gcc)"
 FCFLAGS+=' -g -kind=byte'
 
 "${top_srcdir}/configure" \
+--disable-maintainer-mode \
 --enable-cf-interface \
 --enable-iso-c-interface \
 --enable-mpi \

.ci/bb/mistral-dkrz/test.all.pgi-19.9.0

@@ -9,6 +9,8 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_pgi1990
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 # The configure script does not check the 'lib64' subdirectory, therefore we
 # run it with '--with-eccodes' and the following flags. Note that fixing this
 # in the configure script might be tricky: the 'lib64' subdirectory should be
@@ -24,6 +26,7 @@ LDFLAGS="-L${ECCODES_ROOT}/lib64"
 LDFLAGS+=" -L${HDF5_ROOT}/lib"
 
 "${top_srcdir}/configure" \
+--disable-maintainer-mode \
 --enable-cf-interface \
 --enable-iso-c-interface \
 --enable-mpi \

.ci/bb/mistral-dkrz/test.icon-pio.nag-6.2.6223

@@ -9,6 +9,8 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_nag626223
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 # When configured as part of ICON, C headers, Fortran modules and library files
 # of YAXT and PPM become available only at the build time. The following
 # imitates that.

.ci/bb/mistral-dkrz/test.icon.gcc-6.4.0

@@ -8,6 +8,8 @@ top_srcdir=$(cd "${script_dir}/../../.."; pwd)
 . "${script_dir}/utils.sh"
 init_gcc640
 
+test -f "${top_srcdir}/configure" || ( cd "${top_srcdir}" && ./autogen.sh )
+
 # The configure wrappers of ICON export LD_LIBRARY_PATH:
 export LD_LIBRARY_PATH="${NETCDF_ROOT}/lib:${GRIBAPI_ROOT}/lib:${LD_LIBRARY_PATH-}"
 

.ci/bb/mistral-dkrz/utils.sh

-#
-# Initializes the environment modules.
-#
-init_env_mods ()
-{
-  saved_set=$-
-  set +eu
-  . /sw/rhel6-x64/etc/profile.mistral
-  module use /sw/spack-rhel6/spack/modules/linux-rhel6-haswell
-  set -${saved_set}
-}
-
 #
 # Accepts a list of environment modules and loads them witch conflict
 # resolution.
@@ -101,12 +89,25 @@ switch_for_module ()
   done
 }
 
+#
+# Initializes the environment.
+#
+init_env ()
+{
+  saved_set=$-
+  set +eu
+  . /sw/rhel6-x64/etc/profile.mistral
+  module use /sw/spack-rhel6/spack/modules/linux-rhel6-haswell
+  set -${saved_set}
+  switch_for_module automake libtool autoconf
+}
+
 #
 # Sets variables for tests with GCC 6.4.0.
 #
-init_gcc640()
+init_gcc640 ()
 {
-  init_env_mods
+  init_env
   switch_for_module gcc/6.4.0 openmpi/2.0.2p1_hpcx-gcc64
 
   CC=gcc
@@ -125,9 +126,9 @@ init_gcc640()
 #
 # Sets variables for tests with Intel 17.0.6.
 #
-init_intel1706()
+init_intel1706 ()
 {
-  init_env_mods
+  init_env
   switch_for_module gcc/6.4.0 intel/17.0.6 openmpi/2.0.2p1_hpcx-intel14
 
   CC=icc
@@ -151,9 +152,9 @@ init_intel1706()
 #
 # Sets variables for tests with NAG 6.2.6223.
 #
-init_nag626223()
+init_nag626223 ()
 {
-  init_env_mods
+  init_env
   switch_for_module gcc/6.4.0 nag/6.2
 
   # There is no environment module for MPICH:
@@ -180,9 +181,9 @@ init_nag626223()
 #
 # Sets variables for tests with PGI 19.9.0.
 #
-init_pgi1990()
+init_pgi1990 ()
 {
-  init_env_mods
+  init_env
   switch_for_module pgi/19.9-spack openmpi/2.0.2p2-pgi-19.9
 
   CC=pgcc