Update to libtool 2.4.6.

* This was needed to get working builds on Piz Daint, libtool 2.4.2 generated
  bogus dependencies on libquadmath.so.

app/Makefile.am

@@ -35,3 +35,18 @@ clean-local: clean-local-dirs
 .PHONY: clean-local-dirs
 clean-local-dirs:
 	-rm -rf *.dSYM
+
+# overrides to make regular compilations also use libtool
+COMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CC) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CFLAGS) $(CFLAGS)
+FCCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(FC) -static $(AM_FCFLAGS) $(FCFLAGS)
+LTCXXCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CXX $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CXX) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CXXFLAGS) $(CXXFLAGS)
+LINK = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
+	$(LIBTOOLFLAGS) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@

examples/Makefile.am

@@ -52,3 +52,17 @@ clean-local: clean-local-dirs
 .PHONY: clean-local-dirs
 clean-local-dirs:
 	-rm -rf *.dSYM
+
+# overrides to make regular compilations also use libtool
+# static because the libtool libraries in this directory are meant to
+# be statically linked and there is no use for the PIC object
+COMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CC) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CFLAGS) $(CFLAGS)
+FCCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(FC) -static $(AM_FCFLAGS) $(FCFLAGS)
+CXXCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CXX $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CXX) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CXXFLAGS) $(CXXFLAGS)

examples/pio/Makefile.am

@@ -33,3 +33,21 @@ clean-local: clean-local-dirs
 .PHONY: clean-local-dirs
 clean-local-dirs:
 	-rm -rf *.dSYM
+
+# overrides to make regular compilations also use libtool
+# static because the libtool libraries in this directory are meant to
+# be statically linked and there is no use for the PIC object
+COMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CC) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CFLAGS) $(CFLAGS)
+FCCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(FC) -static $(AM_FCFLAGS) $(FCFLAGS)
+CXXCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CXX $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CXX) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CXXFLAGS) $(CXXFLAGS)
+PPFCCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(FC) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_FCFLAGS) $(FCFLAGS)

interfaces/Makefile.am

@@ -34,11 +34,10 @@ locallibs = $(top_builddir)/src/.libs/libcdi.so @LTLIBOBJS@ @NETCDF_LIBS@ @SZLIB
 
 libcdipp_la_SOURCES = cdi.cpp cdi.hpp
 libcdipp_la_LIBADD  = $(top_builddir)/src/libcdi.la
-libcdipp_la_LDFLAGS = @NETCDF_LIBS@ @SZLIB_LIBS@ $(LDFLAGS)
+AM_LDFLAGS = @NETCDF_LIBS@ @SZLIB_LIBS@ $(LDFLAGS)
 
 CdiInfo_SOURCES     = CdiInfo.cpp
 CdiInfo_LDADD       = libcdipp.la
-CdiInfo_LDFLAGS     = @NETCDF_LIBS@ @SZLIB_LIBS@ $(LDFLAGS)
 #
 #
 if ENABLE_RUBY
@@ -127,3 +126,15 @@ AM_CPPFLAGS = -I$(top_srcdir)/src
 #all-local: $(BINDINGS)
 #
 CLEANFILES  = `ls *~`
+
+# overrides to make regular compilations also use libtool
+COMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CC) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CFLAGS) $(CFLAGS)
+FCCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(FC) -static $(AM_FCFLAGS) $(FCFLAGS)
+CXXCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CXX $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CXX) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CXXFLAGS) $(CXXFLAGS)

tests/Makefile.am

@@ -50,7 +50,7 @@ pio_write_deco2d_SOURCES = pio_write.c pio_write.h deco2d_model.c \
 	pio_write_setup_grid.h pio_write_setup_grid.c
 test_resource_copy_SOURCES = test_resource_copy.c
 test_resource_copy_LDADD = $(UUID_C_LIB) ../src/libcdiresunpack.la $(LDADD)
-test_resource_copy_mpi_SOURCES = test_resource_copy.c
+test_resource_copy_mpi_SOURCES = test_resource_copy_mpi.c
 test_cdf_write_SOURCES = test_cdf_write.c \
 	simple_model_helper.h simple_model_helper.c
 test_cdf_read_SOURCES = test_cdf_read.c
@@ -64,8 +64,6 @@ pio_write_deco2d_LDADD = ../src/libcdipio.la $(UUID_C_LIB) $(MPI_C_LIB)
 TESTS +=  test_resource_copy_mpi_run
 check_PROGRAMS += test_resource_copy_mpi
 test_resource_copy_mpi_LDADD = ../src/libcdipio.la $(UUID_C_LIB)
-test_resource_copy_mpi_CPPFLAGS = $(AM_CPPFLAGS) $(CPPFLAGS) \
-	-DMPI_MARSHALLING
 else
 pio_write_LDADD = $(LDADD) $(UUID_C_LIB)
 pio_write_deco2d_LDADD = $(LDADD) $(UUID_C_LIB)
@@ -85,3 +83,21 @@ clean-local: clean-local-dirs
 .PHONY: clean-local-dirs
 clean-local-dirs:
 	-rm -rf test_cdf_const.d *.dSYM
+
+# overrides to make regular compilations also use libtool
+# static because the libtool libraries in this directory are meant to
+# be statically linked and there is no use for the PIC object
+COMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CC) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CFLAGS) $(CFLAGS)
+FCCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(FC) -static $(AM_FCFLAGS) $(FCFLAGS)
+CXXCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CXX $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(CXX) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_CXXFLAGS) $(CXXFLAGS)
+PPFCCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \
+        $(LIBTOOLFLAGS) --mode=compile $(FC) -static $(DEFS) \
+        $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+        $(AM_FCFLAGS) $(FCFLAGS)

tests/test_resource_copy_mpi.c

+#define MPI_MARSHALLING
+#include "test_resource_copy.c"