Docu update.

CITATION

+Schulzweida, U. (2017), Climate Data Operators (CDO) User Guide, Version 1.8.0,
+https://code.zmaw.de/projects/cdo/embedded/index.html

ChangeLog

-2017-01-24  Uwe Schulzweida
+2017-02-14  Uwe Schulzweida
 
 	* using CDI library version 1.8.0
 	* Version 1.8.0 release

doc/tex/cmor_example.tex

@@ -3,7 +3,7 @@
 \chapter{Example}
 
 In this simple example a prepared ECHAM NetCDF file with the two 3D
-variables ta and ua are cmorized with the CDO operator cmor. 
+variables \textbf{ta} and \textbf{ua} are cmorized with the {\CDO} operator \textbf{cmor}. 
 Here is the NetCDF header of the input file named example.nc:
 \begin{lstlisting}[frame=single, backgroundcolor=\color{pcolor1}, basicstyle=\footnotesize]
 dimensions:
@@ -42,9 +42,9 @@ variables:
       ua:units = "m s-1" ;
 \end{lstlisting}
 The example file contains no global attributes and only the units
-attribute for the variables ta and ua.
+attribute for the variables \textbf{ta} and \textbf{ua}.
 
-The CDO cmor command is:
+The {\CDO} \textbf{cmor} command is:
 \begin{lstlisting}[frame=single, backgroundcolor=\color{pcolor1}, basicstyle=\footnotesize]
    cdo cmor,CMIP6_Amon.json,__info=cmor.rc example.nc
 \end{lstlisting}
@@ -54,9 +54,9 @@ CMIP6/ta_Amon_piControl_MPI-ESM_r1i1p1f1_185001-185912.nc
 CMIP6/ua_Amon_piControl_MPI-ESM_r1i1p1f1_185001-185912.nc
 \end{lstlisting}
 CMIP6\_Amon.json is the CMIP6 table file for monthly mean atmosphere
-data from PCMDI. The option \_\_info=cmor.rc will read settting from
+data from PCMDI. The option \texttt{\_\_info=cmor.rc} will read settting from
 the config file cmor.rc.
-Here is the contens of this config file:
+Here is the contents of this config file:
 \begin{lstlisting}[frame=single, backgroundcolor=\color{pcolor1},  basicstyle=\footnotesize]
 __inpath                 = "/<XXX>/CMOR/cmip6-cmor-tables/Tables"
 __grid_table             = "CMIP6_grids.json"

doc/tex/cmor_int.tex

@@ -3,7 +3,7 @@
 The Climate Data Operators ({\CDO}) software is a collection of operators
 for standard processing of climate and forecast model data.
 
-This document describes the additional {\CDO} operator cmor. This
+This document describes the additional {\CDO} operator \textbf{cmor}. This
 operator is an interface to the CMOR library version 3 from PCMDI.
 The CMOR support is available with {\CDO} release 1.8.0 or later.
 
@@ -21,7 +21,7 @@ site. CMOR relies on these tables to provide much of the metadata
 that is needed in the MIP context, thereby reducing the programming 
 effort required of the individual MIP contributors.
 
-The  {\CDO} operator cmor was developed at the DKRZ and MPI for
+The  {\CDO} operator \textbf{cmor} was developed at the DKRZ and MPI for
 Meteorology to provide an easy interface to the \cite{CMOR} library for a
 standardized preparation of CMIP6 data.
 
@@ -36,7 +36,7 @@ CMOR version 3 needs to be installed before building {\CDO}.
 The CMOR library depends on the following external libraries:
 netCDF4, HDF5, UDUNITS2, zlib and uuid.
 Make sure that you use exactly the same libraries for the {\CDO}
-installation, otherwise the operator cmor will possibly not working correctly.
+installation, otherwise the operator \textbf{cmor} will possibly not working correctly.
 
 \section{Compilation}
 

doc/tex/makedoc

@@ -1221,6 +1221,7 @@ sub print_description {
 	  $line =~ s/\@boldtt\{([^}]*)\}/\\textbf{\\texttt{\1}}/og;
 	  $line =~ s/\@bold\{([^}]*)\}/\\textbf{\1}/og;
 	  $line =~ s/\@celsius/{\\textcelsius}/og;
+	  $line =~ s/ CDO / {\\CDO} /og;
 	  $line =~ s/</\$<\$/og;
 	  $line =~ s/>/\$>\$/og;
 	  $line =~ s/\\exp/\\^\\/og;

doc/tex/mod/CMOR

@@ -7,10 +7,10 @@
 
 @BeginDescription
 
-@C The CDO operator cmor reads the data with the internal IO library CDI
+@C The CDO operator @bold{cmor} reads the data with the internal IO library CDI
 @C and writes the NetCDF result directly with the CMOR library.
 
-The CDO operator cmor selects variables from @file{infile}
+The CDO operator @bold{cmor} selects variables from @file{infile}
 and writes them directly with the CMOR library.
 Each output file contains a single output variable with there coordinates and metadata.
 Much of the metadata written to the output files is defined in the table file.
@@ -18,9 +18,9 @@ The name of the output files are derived from the metadata.
 The supported format of the table file is CMOR3/json.
 These tables are typically made available from MIP web sites.
 
-A comma separated list of "key=value" pairs with optional parameters can be specified.
+A comma separated list of "@var{key=value}" pairs with optional parameters can be specified.
 These optional parameters can be set to overwrite all entries of a parameter
-table defined by the {\texttt __info} command line parameter.
+table defined by the @var{__info} command line parameter.
 Entries with two leading underscores are used for cdo/cmor internal purposes.
 CMOR itself uses entries with one leading underscore internally. The remaining k-v pairs are
 used as attributes. Unknown (to CMOR) keys are simply copied as global attributes.

src/operator_help.h

@@ -5046,7 +5046,7 @@ static const char *CMORHelp[] = {
     "    ",
     "    A comma separated list of \"key=value\" pairs with optional parameters can be specified.",
     "    These optional parameters can be set to overwrite all entries of a parameter",
-    "    table defined by the {\\texttt __info} command line parameter.",
+    "    table defined by the __info command line parameter.",
     "    Entries with two leading underscores are used for cdo/cmor internal purposes.",
     "    CMOR itself uses entries with one leading underscore internally. The remaining k-v pairs are",
     "    used as attributes. Unknown (to CMOR) keys are simply copied as global attributes.",