quickstart: adjusted to new path expectations.

quickstart/00_do_all.sh

@@ -2,8 +2,8 @@
 
 set -ex
 
-source_dir="${HOME}/work/pyicon_data"
-path_data="${HOME}/work/pyicon_data/swift.dkrz.de/example_data_r2b4"
+source_dir="${HOME}/pyicon_data/quickstart_data"
+path_data="${HOME}/pyicon_data/quickstart_data/swift.dkrz.de/example_data_r2b4"
 
 cat > path_data.txt << EOF
 ${path_data}

quickstart/02_create_ckdtree.sh

 #!/bin/bash
+#set -ex
 
 echo "************************************************************" 
 echo " 02_create_ckdtree.sh "
 echo "************************************************************" 
-python config_ckdtree_r2b4_oce_r0004.py
+
+source_dir=`cat source_dir.txt`
+
+grid_dir="${HOME}/pyicon_data/grids/r2b4_oce_r0004"
+if [ ! -d ${grid_dir} ]; then
+  mkdir ${grid_dir}
+fi
+
+echo "rsync -av ${source_dir}/swift.dkrz.de/example_data_r2b4/icon_grid_0036_R02B04_O ${grid_dir}"
+rsync -av ${source_dir}/swift.dkrz.de/example_data_r2b4/icon_grid_0036_R02B04_O/ ${grid_dir}
+
+python ../config_ckdtree/config_ckdtree_r2b4_oce_r0004.py
+cd ${grid_dir}
+ln -sf icon_grid_0036_R02B04_O_fx.nc r2b4_oce_r0004_L40_fx.nc