[hamocc_quickplots]: qp_driver.py: improvements for HAMOCC quickplots

pyicon/quickplots/qp_driver.py

@@ -358,7 +358,7 @@ if do_hamocc_plots:
   fig_names += ['sec:Hamocc time series']
   fig_names += ['ts_global_npp', 'ts_global_nppcya', 'ts_global_zoograzing', 'ts_global_netco2flux']
   fig_names += ['ts_global_surface_alk', 'ts_global_surface_dic', 'ts_global_surface_sil', 'ts_global_surface_phos']
-  fig_names += ['ts_WC_denit', 'ts_sed_denit', 'ts_n2fix', 'ts_global_opal_prod', 'ts_global_caco3_prod']
+  fig_names += ['ts_global_surface_nitrate', 'ts_WC_denit', 'ts_sed_denit', 'ts_n2fix', 'ts_global_opal_prod', 'ts_global_caco3_prod']
   fig_names += ['ts_global_OMexp90', 'ts_global_calcexp90', 'ts_global_opalexp90']
   fig_names += ['sec:Hamocc surface maps']
   fig_names += ['srf_phyp', 'srf_zoop', 'srf_cya', 'srf_silicate', 'srf_nitrate', 'srf_phosphate']
@@ -2869,6 +2869,10 @@ for tave_int in tave_ints:
     if fig_name in fig_names:
       FigInf, Dhandles = pyicqp.qp_timeseries(IcD_ham_mon, fname_ham_mon, ['global_surface_silicate'], t1=t1, t2=t2, ave_freq=ave_freq, var_fac=1e6, units='mmol Si m$^{-3}$', omit_last_file=omit_last_file, save_data=save_data, fpath_nc=path_nc+fig_name+'.nc')
       save_fig(fig_name, path_pics, fig_name)
+    fig_name = 'ts_global_surface_nitrate'
+    if fig_name in fig_names:
+      FigInf, Dhandles = pyicqp.qp_timeseries(IcD_ham_mon, fname_ham_mon, ['global_surface_nitrate'], t1=t1, t2=t2, ave_freq=ave_freq, var_fac=1e6, units='mmol N m$^{-3}$', omit_last_file=omit_last_file, save_data=save_data, fpath_nc=path_nc+fig_name+'.nc')
+      save_fig(fig_name, path_pics, fig_name)
     fig_name = 'ts_global_opal_prod'
     if fig_name in fig_names:
       FigInf, Dhandles = pyicqp.qp_timeseries(IcD_ham_mon, fname_ham_mon, ['global_opal_production'], t1=t1, t2=t2, ave_freq=ave_freq, omit_last_file=omit_last_file, save_data=save_data, fpath_nc=path_nc+fig_name+'.nc')
@@ -2887,7 +2891,7 @@ for tave_int in tave_ints:
       save_fig(fig_name, path_pics, fig_name)
     fig_name = 'ts_global_opalexp90'
     if fig_name in fig_names:
-      FigInf, Dhandles = pyicqp.qp_timeseries(IcD_ham_mon, fname_ham_mon, ['global_opal_export_at_90m'], t1=t1, t2=t2, ave_freq=ave_freq, var_fac=365.25*24*60*60*1e-9, units='Tmol Si yr$^{-1}$', omit_last_file=omit_last_file, save_data=save_data, fpath_nc=path_nc+fig_name+'.nc')
+      FigInf, Dhandles = pyicqp.qp_timeseries(IcD_ham_mon, fname_ham_mon, ['global_opal_export_at_90m'], t1=t1, t2=t2, ave_freq=ave_freq, var_fac=365.25*24*60*60*1e-9, units=' [Tmol Si yr$^{-1}$]', omit_last_file=omit_last_file, save_data=save_data, fpath_nc=path_nc+fig_name+'.nc')
       save_fig(fig_name, path_pics, fig_name)
 
     # ------------------------------------------------------------------------------
@@ -3025,9 +3029,9 @@ for tave_int in tave_ints:
     fig_name = 'srf_cya'
     if fig_name in fig_names:
       FigInf = pyicqp.qp_hplot(fpath=path_data+fname_ham_inv, var='phydiaz', depth=0, it=0,
-                               t1=t1, t2=t2,
-                               clim=[0,0.5], cincr=0.025, cmap='cmo.amp',
-                               var_fac=1e6, units='mmol P m$^{-3}$',
+                               t1=t1, t2=t2, logplot=True,
+                               clim=[-5.0,0.0], cincr=0.5, cmap='cmo.amp',
+                               var_fac=1e6, units='log$_{10}$ mmol P m$^{-3}$',
                                IcD=IcD_ham_inv,
                                save_data=save_data, fpath_nc=path_nc+fig_name+'.nc',
                                **Ddict_global)
@@ -3143,7 +3147,7 @@ for tave_int in tave_ints:
     if fig_name in fig_names:
       FigInf = pyicqp.qp_hplot(fpath=path_data+fname_ham_inv, var='dfe', depth=0, it=0,
                                t1=t1, t2=t2,
-                               var_fac=1e9, units='$ umol Fe m$^{-3}$',
+                               var_fac=1e9, units='umol Fe m$^{-3}$',
                                clim=[0,6], cincr=0.3, cmap='cmo.matter',
                                IcD=IcD_ham_inv,
                                save_data=save_data, fpath_nc=path_nc+fig_name+'.nc',