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dkrz-sw
YAC
Commits
e85035fe
Commit
e85035fe
authored
1 month ago
by
Moritz Hanke
Browse files
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removes limitation of routine yac_duplicate_stencils to YAC_LOC_CELL
parent
e025e16d
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2 changed files
src/utils/duplicate_stencils.c
+22
-7
22 additions, 7 deletions
src/utils/duplicate_stencils.c
tests/utils/test_duplicate_stencils_parallel.c
+73
-65
73 additions, 65 deletions
tests/utils/test_duplicate_stencils_parallel.c
with
95 additions
and
72 deletions
src/utils/duplicate_stencils.c
+
22
−
7
View file @
e85035fe
...
...
@@ -94,19 +94,34 @@ void yac_duplicate_stencils(
char
const
*
routine
=
"yac_duplicate_stencils"
;
YAC_ASSERT_F
(
location
==
YAC_LOC_CELL
,
"ERROR(%s): only supported for cells"
,
routine
);
yac_int
*
duplicated_global_ids
=
xmalloc
(
nbr_duplicated
*
sizeof
(
*
duplicated_global_ids
));
struct
yac_basic_grid_data
*
grid_data
=
yac_basic_grid_get_data
(
tgt_grid
);
yac_int
const
*
cell_ids
=
grid_data
->
cell_ids
;
struct
yac_basic_grid_data
*
grid_data
=
yac_basic_grid_get_data
(
tgt_grid
);
YAC_ASSERT_F
(
(
location
==
YAC_LOC_CELL
)
||
(
location
==
YAC_LOC_CORNER
)
||
(
location
==
YAC_LOC_EDGE
),
"ERROR(%s): invalid location"
,
routine
)
yac_int
*
point_ids
;
switch
(
location
)
{
default:
case
(
YAC_LOC_CELL
):
point_ids
=
grid_data
->
cell_ids
;
break
;
case
(
YAC_LOC_CORNER
):
point_ids
=
grid_data
->
vertex_ids
;
break
;
case
(
YAC_LOC_EDGE
):
point_ids
=
grid_data
->
edge_ids
;
break
;
};
// get global ids of all duplicated target cells
for
(
size_t
i
=
0
;
i
<
nbr_duplicated
;
++
i
)
duplicated_global_ids
[
i
]
=
cell
_ids
[
tgt_duplicated_idx
[
i
]];
duplicated_global_ids
[
i
]
=
point
_ids
[
tgt_duplicated_idx
[
i
]];
// get target global ids of all local stencils
size_t
stencil_count
=
yac_interp_weights_get_interp_count
(
weights
);
...
...
This diff is collapsed.
Click to expand it.
tests/utils/test_duplicate_stencils_parallel.c
+
73
−
65
View file @
e85035fe
...
...
@@ -33,72 +33,80 @@ int main(void) {
return
TEST_EXIT_CODE
;
}
// generate dummy grid
struct
yac_basic_grid_data
grid_data
=
generate_dummy_grid_data
(
5
,
15
,
comm_rank
*
5
);
struct
yac_basic_grid
*
grid
=
yac_basic_grid_new
(
"grid"
,
grid_data
);
// generate weights
struct
yac_interp_weights
*
weights
=
yac_interp_weights_new
(
MPI_COMM_WORLD
,
YAC_LOC_CELL
,
(
enum
yac_location
[]){
YAC_LOC_CELL
},
1
);
struct
remote_point
tgts_data
[
5
];
struct
remote_points
tgts
=
{.
data
=
tgts_data
};
struct
remote_point
srcs
[
5
];
yac_int
tgts_global_ids
[
3
][
5
]
=
{{
0
,
1
,
2
,
5
,
6
},{
7
,
8
,
9
},{
-
1
}};
int
tgts_ranks
[
3
][
5
]
=
{{
0
,
0
,
0
,
1
,
1
},{
1
,
1
,
1
},{
-
1
}};
uint64_t
tgts_orig_poses
[
3
][
5
]
=
{{
0
,
1
,
2
,
0
,
1
},{
2
,
3
,
4
},{
UINT64_MAX
}};
int
srcs_ranks
[
3
][
5
]
=
{{
1
,
1
,
1
,
1
,
2
},{
2
,
2
,
2
},{
-
1
}};
uint64_t
srcs_orig_poses
[
3
][
5
]
=
{{
0
,
1
,
2
,
3
,
0
},{
1
,
2
,
3
},{
UINT64_MAX
}};
size_t
num_tgts
[
3
]
=
{
5
,
3
,
0
};
// generate initial weights
tgts
.
count
=
num_tgts
[
comm_rank
];
for
(
size_t
i
=
0
;
i
<
tgts
.
count
;
++
i
)
{
tgts
.
data
[
i
].
global_id
=
tgts_global_ids
[
comm_rank
][
i
];
tgts
.
data
[
i
].
data
.
count
=
1
;
tgts
.
data
[
i
].
data
.
data
.
single
.
rank
=
tgts_ranks
[
comm_rank
][
i
];
tgts
.
data
[
i
].
data
.
data
.
single
.
orig_pos
=
tgts_orig_poses
[
comm_rank
][
i
];
srcs
[
i
].
data
.
count
=
1
;
srcs
[
i
].
data
.
data
.
single
.
rank
=
srcs_ranks
[
comm_rank
][
i
];
srcs
[
i
].
data
.
data
.
single
.
orig_pos
=
srcs_orig_poses
[
comm_rank
][
i
];
enum
yac_location
locations
[]
=
{
YAC_LOC_CELL
,
YAC_LOC_CORNER
,
YAC_LOC_EDGE
};
enum
{
NUM_LOCATIONS
=
sizeof
(
locations
)
/
sizeof
(
locations
[
0
])};
for
(
size_t
loc_idx
=
0
;
loc_idx
<
NUM_LOCATIONS
;
++
loc_idx
)
{
// generate dummy grid
struct
yac_basic_grid_data
grid_data
=
generate_dummy_grid_data
(
5
,
15
,
comm_rank
*
5
);
struct
yac_basic_grid
*
grid
=
yac_basic_grid_new
(
"grid"
,
grid_data
);
// generate weights
struct
yac_interp_weights
*
weights
=
yac_interp_weights_new
(
MPI_COMM_WORLD
,
locations
[
loc_idx
],
(
enum
yac_location
[]){
locations
[
loc_idx
]},
1
);
struct
remote_point
tgts_data
[
5
];
struct
remote_points
tgts
=
{.
data
=
tgts_data
};
struct
remote_point
srcs
[
5
];
yac_int
tgts_global_ids
[
3
][
5
]
=
{{
0
,
1
,
2
,
5
,
6
},{
7
,
8
,
9
},{
-
1
}};
int
tgts_ranks
[
3
][
5
]
=
{{
0
,
0
,
0
,
1
,
1
},{
1
,
1
,
1
},{
-
1
}};
uint64_t
tgts_orig_poses
[
3
][
5
]
=
{{
0
,
1
,
2
,
0
,
1
},{
2
,
3
,
4
},{
UINT64_MAX
}};
int
srcs_ranks
[
3
][
5
]
=
{{
1
,
1
,
1
,
1
,
2
},{
2
,
2
,
2
},{
-
1
}};
uint64_t
srcs_orig_poses
[
3
][
5
]
=
{{
0
,
1
,
2
,
3
,
0
},{
1
,
2
,
3
},{
UINT64_MAX
}};
size_t
num_tgts
[
3
]
=
{
5
,
3
,
0
};
// generate initial weights
tgts
.
count
=
num_tgts
[
comm_rank
];
for
(
size_t
i
=
0
;
i
<
tgts
.
count
;
++
i
)
{
tgts
.
data
[
i
].
global_id
=
tgts_global_ids
[
comm_rank
][
i
];
tgts
.
data
[
i
].
data
.
count
=
1
;
tgts
.
data
[
i
].
data
.
data
.
single
.
rank
=
tgts_ranks
[
comm_rank
][
i
];
tgts
.
data
[
i
].
data
.
data
.
single
.
orig_pos
=
tgts_orig_poses
[
comm_rank
][
i
];
srcs
[
i
].
data
.
count
=
1
;
srcs
[
i
].
data
.
data
.
single
.
rank
=
srcs_ranks
[
comm_rank
][
i
];
srcs
[
i
].
data
.
data
.
single
.
orig_pos
=
srcs_orig_poses
[
comm_rank
][
i
];
}
yac_interp_weights_add_direct
(
weights
,
&
tgts
,
srcs
);
// duplicate some stencils
yac_int
tgt_orig_global_id
[
3
][
4
]
=
{{
8
,
9
},{
-
1
},{
0
,
1
,
8
,
9
}};
size_t
tgt_duplicated_idx
[
3
][
4
]
=
{{
3
,
4
},{
SIZE_MAX
},{
0
,
1
,
3
,
4
}};
size_t
nbr_duplicated
[
3
]
=
{
2
,
0
,
4
};
yac_duplicate_stencils
(
weights
,
grid
,
tgt_orig_global_id
[
comm_rank
],
tgt_duplicated_idx
[
comm_rank
],
nbr_duplicated
[
comm_rank
],
locations
[
loc_idx
]);
// get interpolation from the weights
struct
yac_interpolation
*
interpolation
=
yac_interp_weights_get_interpolation
(
weights
,
YAC_MAPPING_ON_SRC
,
1
,
YAC_FRAC_MASK_NO_VALUE
,
1
.
0
,
0
.
0
,
NULL
);
// execute interpolation
double
src_field_data
[
3
][
4
]
=
{{
-
1
,
-
1
,
-
1
,
-
1
},
{
0
,
1
,
2
,
3
},
{
4
,
5
,
6
,
7
}};
double
**
src_fields
[
1
]
=
{(
double
*
[
1
]){
src_field_data
[
comm_rank
]}};
double
*
tgt_field
[
1
]
=
{(
double
[
5
]){
-
1
,
-
1
,
-
1
,
-
1
,
-
1
}};
yac_interpolation_execute
(
interpolation
,
src_fields
,
tgt_field
);
// check results
double
ref_tgt_field
[
3
][
5
]
=
{{
0
,
1
,
2
,
6
,
7
},
{
3
,
4
,
5
,
6
,
7
},
{
0
,
1
,
-
1
,
6
,
7
}};
for
(
size_t
i
=
0
;
i
<
5
;
++
i
)
if
(
ref_tgt_field
[
comm_rank
][
i
]
!=
tgt_field
[
0
][
i
])
PUT_ERR
(
"ERROR in yac_duplicate_stencils"
);
// cleanup
yac_interpolation_delete
(
interpolation
);
yac_interp_weights_delete
(
weights
);
yac_basic_grid_delete
(
grid
);
}
yac_interp_weights_add_direct
(
weights
,
&
tgts
,
srcs
);
// duplicate some stencils
yac_int
tgt_orig_global_id
[
3
][
4
]
=
{{
8
,
9
},{
-
1
},{
0
,
1
,
8
,
9
}};
size_t
tgt_duplicated_idx
[
3
][
4
]
=
{{
3
,
4
},{
SIZE_MAX
},{
0
,
1
,
3
,
4
}};
size_t
nbr_duplicated
[
3
]
=
{
2
,
0
,
4
};
yac_duplicate_stencils
(
weights
,
grid
,
tgt_orig_global_id
[
comm_rank
],
tgt_duplicated_idx
[
comm_rank
],
nbr_duplicated
[
comm_rank
],
YAC_LOC_CELL
);
// get interpolation from the weights
struct
yac_interpolation
*
interpolation
=
yac_interp_weights_get_interpolation
(
weights
,
YAC_MAPPING_ON_SRC
,
1
,
YAC_FRAC_MASK_NO_VALUE
,
1
.
0
,
0
.
0
,
NULL
);
// execute interpolation
double
src_field_data
[
3
][
4
]
=
{{
-
1
,
-
1
,
-
1
,
-
1
},
{
0
,
1
,
2
,
3
},
{
4
,
5
,
6
,
7
}};
double
**
src_fields
[
1
]
=
{(
double
*
[
1
]){
src_field_data
[
comm_rank
]}};
double
*
tgt_field
[
1
]
=
{(
double
[
5
]){
-
1
,
-
1
,
-
1
,
-
1
,
-
1
}};
yac_interpolation_execute
(
interpolation
,
src_fields
,
tgt_field
);
// check results
double
ref_tgt_field
[
3
][
5
]
=
{{
0
,
1
,
2
,
6
,
7
},
{
3
,
4
,
5
,
6
,
7
},
{
0
,
1
,
-
1
,
6
,
7
}};
for
(
size_t
i
=
0
;
i
<
5
;
++
i
)
if
(
ref_tgt_field
[
comm_rank
][
i
]
!=
tgt_field
[
0
][
i
])
PUT_ERR
(
"ERROR in yac_duplicate_stencils"
);
// cleanup
yac_interpolation_delete
(
interpolation
);
yac_interp_weights_delete
(
weights
);
yac_basic_grid_delete
(
grid
);
xt_finalize
();
MPI_Finalize
();
...
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