Running with gitlab-runner 17.9.1 (bbf75488)
  on slurm instance runner t1_ZJNiN3, system ID: s_3b9487865d15
section_start:1742807717:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver Jacamar CI 0.24.1...
section_end:1742807718:prepare_executor
section_start:1742807718:prepare_script
Preparing environment
Targeting sbatch executor
Static builds directory in use, all jobs results kept. Please be aware of large disk space requirements when using this runner (minimum days: 1)
Running as m214003 UID: 1403 GID: 32054
Local time: 2025-03-24 10:15:18

Running on hpc-ci.dkrz.de via hpc-ci.dkrz.de...
section_end:1742807718:prepare_script
section_start:1742807718:get_sources
Getting source from Git repository
Fetching changes with git depth set to 1...
Initialized empty Git repository in /scratch/hpc-ci/m214003/static/00701120/mpim-sw/libcdi/.git/
Created fresh repository.
Checking out e391183c as detached HEAD (ref is refs/merge-requests/146/head)...
Skipping Git submodules setup
section_end:1742807722:get_sources
section_start:1742807722:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 17.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/groups/gitlab-org/-/epics/6112
Slurm job command: sbatch --wait  --job-name=ci-701120_1742807722 --output=/scratch/hpc-ci/m214003/scripts/t1_ZJNiN3/000/mpim-sw/libcdi/701120/slurm-ci-701120.out --account=ka1125 --partition=shared --ntasks=8 --time=15:00 --nodes=1 /scratch/hpc-ci/m214003/scripts/t1_ZJNiN3/000/mpim-sw/libcdi/701120/build_script.bash
Submitted batch job 16040022
$ module purge
$ ${CI_PROJECT_DIR}/.ci/bb/levante-dkrz/${CI_JOB_NAME}
module load git
module load ruby/3.0.2-gcc-11.2.0
module load gcc/11.2.0-gcc-11.2.0
module load openmpi/4.1.2-gcc-11.2.0
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'.
libtoolize: copying file 'config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:25: installing 'config/compile'
configure.ac:17: installing 'config/config.guess'
configure.ac:17: installing 'config/config.sub'
configure.ac:20: installing 'config/install-sh'
configure.ac:20: installing 'config/missing'
app/Makefile.am: installing 'config/depcomp'
parallel-tests: installing 'config/test-driver'
interfaces/python/Makefile.am:3: installing 'config/py-compile'
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'.
libtoolize: copying file 'config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
applying contrib/00nagfor-libtool-patch/nagfor-libtool-2.4.6.patch
patching file config/ltmain.sh
Hunk #4 succeeded at 9566 (offset 2 lines).
Hunk #5 succeeded at 10302 (offset 2 lines).
applying contrib/01aix-deplib-rpath-patch/aix-deplib-libtool.patch
patching file config/ltmain.sh
Hunk #1 succeeded at 8635 (offset 1464 lines).
applying contrib/03ltmain-ld-groups-patch/ltmain-ld-groups-libtool-2.4.6.patch
patching file config/ltmain.sh
Hunk #2 succeeded at 7886 (offset 2 lines).
applying contrib/04ltmain-xlinker-patch/ltmain-xlinker-patch.patch
patching file config/ltmain.sh
applying contrib/05macos-nagfor-patch/macos-nagfor.patch
patching file config/ltmain.sh
Hunk #1 succeeded at 8960 (offset 2 lines).
applying contrib/06ltmain_nag_pthread-patch/ltmain_nag_pthread.patch
patching file config/ltmain.sh
Hunk #1 succeeded at 7938 (offset 2 lines).
Hunk #2 succeeded at 9578 (offset 2 lines).
Hunk #3 succeeded at 10350 (offset 2 lines).
applying contrib/07ltmain-early-xcompile-patch/ltmain-early-xcompile-libtool-2.4.6.patch
patching file config/ltmain.sh
applying contrib/08ltmain-parallel-printf-patch/ltmain-parallel-printf.patch
patching file config/ltmain.sh
configure.ac:25: installing 'config/compile'
configure.ac:20: installing 'config/missing'
app/Makefile.am: installing 'config/depcomp'
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... yes
configure: setting up libtool
checking how to print strings... printf
checking whether make supports the include directive... yes (GNU style)
checking for gcc... mpicc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking whether mpicc understands -c and -o together... yes
checking dependency style of mpicc... gcc3
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... 
yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... no
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for mpicc option to accept ISO C99... none needed
checking For conformance to POSIX.1-2001.... yes
checking for C/C++ restrict keyword... __restrict
checking whether we are using the GNU Fortran compiler... yes
checking whether mpif90 accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for mpif90 option to produce PIC... -fPIC
checking if mpif90 PIC flag -fPIC works... yes
checking if mpif90 static flag -static works... no
checking if mpif90 supports -c -o file.o... yes
checking if mpif90 supports -c -o file.o... (cached) yes
checking whether the mpif90 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking whether the Fortran compiler works... yes
checking for flag to alter module search path... -I
checking for Fortran compiler flag needed to specify search paths for the "INCLUDE" statement... -I
checking for conftest_module module file name... conftest_module.mod
checking for suffix of module files... mod
checking how to define symbols for preprocessed Fortran... -D
checking if Fortran compiler can handle complex CHARACTER interoperability... 
yes
checking C preprocessor flags for Fortran calling convention cfortran.h... -DgFortran -DgFortran8 (probed)
checking if C externals constructed with cfortran.h work... yes
configure: setting up libtool
checking any compiler has problems building shared objects... no
configure: creating ./config.lt
config.lt: creating libtool
checking whether libtool can link C programs... yes
checking whether libtool can link Fortran programs... yes
checking whether byte ordering is bigendian... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... yes
checking for getpagesize... yes
checking for working mmap... yes
checking for struct stat.st_blksize... yes
checking for malloc.h... yes
checking for sys/time.h... yes
checking for execinfo.h... yes
checking size parameter type for backtrace()... int
checking for library containing backtrace... 
none required
checking for mallinfo... yes
checking for pwrite... yes
checking for timegm... yes
checking for getline... yes
checking for uuid/uuid.h extra include path... (none required)
checking for library containing uuid_generate...  -luuid
checking for uuid/uuid.h... yes
checking whether uuid_generate is declared... yes
checking whether isnan is declared... yes
checking whether _SC_LARGE_PAGESIZE is declared... no
checking whether PAGESIZE is declared... no
checking whether PAGE_SIZE is declared... no
checking whether _SC_PAGE_SIZE is declared... yes
checking whether _SC_PAGESIZE is declared... yes
checking whether _PC_REC_XFER_ALIGN is declared... yes
checking whether POSIX_REC_XFER_ALIGN is declared... no
checking for library containing floor... -lm
checking whether __builtin_ctz is declared... yes
checking whether mpicc is Clang... no
checking whether pthreads work with "-pthread" and "-lpthread"... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking whether more special flags are required for pthreads... no
checking for PTHREAD_PRIO_INHERIT... yes
CC:mpicc CFLAGS:-g -O2 -pthread LIBS:-lpthread -lm -luuid 
checking for fdb5 library... suppressed
checking for szlib library... suppressed
checking for netcdf.h... yes
checking for library containing nc_open... 
-lnetcdf
checking for nc-config... /sw/spack-levante/netcdf-c-4.8.1-6qheqr/bin/nc-config
checking netcdf's OpenDAP support... yes
checking netcdf's Zarr support... yes
checking netcdf's nc2 support... yes
checking netcdf's nc4 support... yes
checking netcdf's nc4/hdf5 support... yes
checking whether nc_inq_var_filter is declared... yes
checking for library containing nc_inq_var_filter_ids... none required
checking whether nc_inq_var_filter_ids is declared... yes
checking for library containing ncaux_h5filterspec_parselist... none required
checking whether ncaux_h5filterspec_parselist is declared... yes
checking netcdf's nc4/szlib support... yes
checking for library containing nc_def_var_szip... none required
checking for library containing H5TS_mutex_lock... no
checking for library containing H5get_libversion... no
checking for grib_api.h... yes
checking for library containing grib_get_message... -leccodes
checking for GRIB support... yes
checking for ACROSS support... yes
checking for CGRIBEX support... yes
checking for SERVICE support... yes
checking for EXTRA support... yes
checking for IEG support... yes
checking for building an additional static CDI binary... no
checking for HIRLAM extensions... no
checking for grib_get_length... yes
checking for mpi.h extra include path... (none required)
checking for library containing MPI_Waitall... (none required)
checking for mpirun... /sw/spack-levante/openmpi-4.1.2-mnmady/bin/mpirun
checking if /sw/spack-levante/openmpi-4.1.2-mnmady/bin/mpirun works... 
yes
checking for mpi extra module path... (none required)
checking for library containing mpi_waitall... (none required)
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for yaxt_c... yes
checking for yaxt.h extra include path... -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include 
checking for library containing xt_initialized... -L/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/lib -lyaxt_c 
checking whether MPI_UINT64_T is declared... yes
checking for xt_redist_p2p_aext_new... no
checking for yaxt... yes
checking for yaxt extra module path... -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include 
checking for library containing xt_initialized... -L/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/lib -lyaxt -lyaxt_c 
checking for ppm_core... yes
checking for ppm/ppm.h extra include path... -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include 
checking for library containing PPM_initialize... 
-L/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/lib -lscalesppmcore 
checking for ppm/dist_array.h... yes
checking for netcdf_meta.h... yes
checking parallel netcdf's pnetcdf support... yes
checking for netcdf_par.h... yes
checking whether MPI_Bcast is declared... yes
checking whether nc_inq_format_extended is declared... yes
checking for thread local storage (TLS) class... _Thread_local
checking whether _POSIX_ASYNCHRONOUS_IO is declared... yes
checking for library containing aio_suspend... -lrt
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating app/Makefile
config.status: creating cdi.settings
config.status: creating examples/Makefile
config.status: creating examples/pio/Makefile
config.status: creating interfaces/Makefile
config.status: creating interfaces/python/Makefile
config.status: creating src/Makefile
config.status: creating src/cmake/cdi/cdi-config-version.cmake
config.status: creating src/cmake/cdi/cdi-config.cmake
config.status: creating src/pkgconfig/cdi.pc
config.status: creating src/pkgconfig/cdi_f2003.pc
config.status: creating src/pkgconfig/cdipio.pc
config.status: creating tests/Makefile
config.status: creating tests/test_cksum_base
config.status: creating interfaces/test_cpp_nc.run
config.status: creating interfaces/test_python_grb.run
config.status: creating interfaces/test_python_nc.run
config.status: creating interfaces/test_ruby_grb.run
config.status: creating interfaces/test_ruby_nc.run
config.status: creating tables/gen_tableheaderfile
config.status: creating tests/pio_cksum_asynch.run
config.status: creating tests/pio_cksum_fpguard.run
config.status: creating tests/pio_cksum_grb2.run
config.status: creating tests/pio_cksum_mpi_fw_at_all.run
config.status: creating tests/pio_cksum_mpi_fw_at_reblock.run
config.status: creating tests/pio_cksum_mpi_fw_ordered.run
config.status: creating tests/pio_cksum_mpinonb.run
config.status: creating tests/pio_cksum_nc.run
config.status: creating tests/pio_cksum_nc2.run
config.status: creating tests/pio_cksum_nc4.run
config.status: creating tests/pio_cksum_writer.run
config.status: creating tests/pio_write.parallel.run
config.status: creating tests/pio_write.run
config.status: creating tests/pio_write_deco2d.parallel.run
config.status: creating tests/pio_write_deco2d.run
config.status: creating tests/pio_write_dist_array.run
config.status: creating tests/test_byteswap.run
config.status: creating tests/test_cdf_const.run
config.status: creating tests/test_cdf_transformation.run
config.status: creating tests/test_cksum_ext.run
config.status: creating tests/test_cksum_grb.run
config.status: creating tests/test_cksum_grb2.run
config.status: creating tests/test_cksum_ieg.run
config.status: creating tests/test_cksum_nc.run
config.status: creating tests/test_cksum_nc2.run
config.status: creating tests/test_cksum_nc4.run
config.status: creating tests/test_cksum_nc_chunk.run
config.status: creating tests/test_cksum_srv.run
config.status: creating tests/test_f2003.run
config.status: creating tests/test_grib.run
config.status: creating tests/test_resource_copy.parallel.run
config.status: creating tests/test_resource_copy.run
config.status: creating tests/test_table.run
config.status: creating src/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: CDI is configured with the following options:
{
  "build" : {
    "tools" : {
      "CC"       : "mpicc",
      "CPP"      : "mpicc -E",
      "CPPFLAGS" : "-I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8",
      "CFLAGS"   : "-g -O2 -pthread -Wall -Werror",
      "LDFLAGS"  : "-L/sw/spack-levante/netcdf-c-4.8.1-6qheqr/lib -L/sw/spack-levante/eccodes-2.21.0-4ywkk4/lib64",
      "LIBS"     : "-leccodes -lnetcdf -lpthread -lm -luuid ",
      "FC"       : "mpif90",
      "F77"      : "no",
      "FCFLAGS"  : "-g -O2 -Wall -Werror",
      "LD"       : "/usr/bin/ld -m elf_x86_64",
      "NM"       : "/usr/bin/nm -B",
      "AR"       : "ar",
      "DLLTOOL"  : "false",
      "OBJDUMP"  : "objdump",
      "STRIP"    : "strip",
      "RANLIB"   : "ranlib",
      "INSTALL"  : "/usr/bin/install -c"
    },
    "libraries" : {
      "threads"    : {
        "lib"      : "",
        "include"  : ""
      },
      "mpi"        : {
        "libs"     : "",
        "cflags"   : "",
        "fclibs"   : "",
        "fcflags"  : ""
      },
      "fdb5"    : {
        "lib"      : "",
        "include"  : ""
      },
      "szlib"    : {
        "lib"      : "",
        "include"  : ""
      },
      "netcdf"   : {
        "lib"      : " -L/sw/spack-levante/netcdf-c-4.8.1-6qheqr/lib -lnetcdf",
        "include"  : " -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include"
      },
      "eccodes" : {
        "lib"      : "",
        "include"  : ""
      }
    },
    "platform" : {
      "SYSTEM_TYPE" : "x86_64-pc-linux-gnu"
    }
  },
  "features" : {
    "enable_cdi_lib" : true,
    "grib"           : "yes",
    "cgribex"        : "yes",
    "service"        : "yes",
    "extra"          : "yes",
    "ieg"            : "yes",
    "enable_mpi"     : true,
    "parallel_nc4"   : 1,
    "enable_python"  : false,
    "enable_ruby"    : false,
    "across"         : "yes"
  }
}
configure:

  Configuration completed.

    You can now run 'make' to compile the CDI package and 'make install' to install it afterwards.

Making all in src
make[1]: Entering directory '/scratch/hpc-ci/m214003/static/00701120/mpim-sw/libcdi/src'
(CDPATH="${ZSH_VERSION+.}:" && cd .. && /bin/sh /scratch/hpc-ci/m214003/static/00701120/mpim-sw/libcdi/config/missing autoheader)
rm -f stamp-h1
touch config.h.in
cd .. && /bin/sh ./config.status src/config.h
config.status: creating src/config.h
config.status: src/config.h is unchanged
make  all-am
make[2]: Entering directory '/scratch/hpc-ci/m214003/static/00701120/mpim-sw/libcdi/src'
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT async_worker.lo -MD -MP -MF .deps/async_worker.Tpo -c -o async_worker.lo async_worker.c
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT basetime.lo -MD -MP -MF .deps/basetime.Tpo -c -o basetime.lo basetime.c
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT binary.lo -MD -MP -MF .deps/binary.Tpo -c -o binary.lo binary.c
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT calendar.lo -MD -MP -MF .deps/calendar.Tpo -c -o calendar.lo calendar.c
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT cdf.lo -MD -MP -MF .deps/cdf.Tpo -c -o cdf.lo cdf.c
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT cdf_filter.lo -MD -MP -MF .deps/cdf_filter.Tpo -c -o cdf_filter.lo cdf_filter.c
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT cdf_int.lo -MD -MP -MF .deps/cdf_int.Tpo -c -o cdf_int.lo cdf_int.c
/bin/sh ../libtool  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I.  -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include  -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include   -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8  -g -O2 -pthread -Wall -Werror -MT cdf_lazy_grid.lo -MD -MP -MF .deps/cdf_lazy_grid.Tpo -c -o cdf_lazy_grid.lo cdf_lazy_grid.c
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT binary.lo -MD -MP -MF .deps/binary.Tpo -c binary.c  -fPIC -DPIC -o .libs/binary.o
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT cdf.lo -MD -MP -MF .deps/cdf.Tpo -c cdf.c  -fPIC -DPIC -o .libs/cdf.o
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT basetime.lo -MD -MP -MF .deps/basetime.Tpo -c basetime.c  -fPIC -DPIC -o .libs/basetime.o
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT async_worker.lo -MD -MP -MF .deps/async_worker.Tpo -c async_worker.c  -fPIC -DPIC -o .libs/async_worker.o
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT calendar.lo -MD -MP -MF .deps/calendar.Tpo -c calendar.c  -fPIC -DPIC -o .libs/calendar.o
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT cdf_filter.lo -MD -MP -MF .deps/cdf_filter.Tpo -c cdf_filter.c  -fPIC -DPIC -o .libs/cdf_filter.o
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT cdf_int.lo -MD -MP -MF .deps/cdf_int.Tpo -c cdf_int.c  -fPIC -DPIC -o .libs/cdf_int.o
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT cdf_lazy_grid.lo -MD -MP -MF .deps/cdf_lazy_grid.Tpo -c cdf_lazy_grid.c  -fPIC -DPIC -o .libs/cdf_lazy_grid.o
cdf_filter.c: In function 'cdf_def_var_filter':
cdf_filter.c:98:24: error: implicit declaration of function 'nc_inq_filter_avail' [-Werror=implicit-function-declaration]
   98 |               status = nc_inq_filter_avail(ncid, filterid);
      |                        ^~~~~~~~~~~~~~~~~~~
cc1: all warnings being treated as errors
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT basetime.lo -MD -MP -MF .deps/basetime.Tpo -c basetime.c -o basetime.o >/dev/null 2>&1
make[2]: *** [Makefile:1012: cdf_filter.lo] Error 1
make[2]: *** Waiting for unfinished jobs....
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT calendar.lo -MD -MP -MF .deps/calendar.Tpo -c calendar.c -o calendar.o >/dev/null 2>&1
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT binary.lo -MD -MP -MF .deps/binary.Tpo -c binary.c -o binary.o >/dev/null 2>&1
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT async_worker.lo -MD -MP -MF .deps/async_worker.Tpo -c async_worker.c -o async_worker.o >/dev/null 2>&1
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT cdf.lo -MD -MP -MF .deps/cdf.Tpo -c cdf.c -o cdf.o >/dev/null 2>&1
mv -f .deps/calendar.Tpo .deps/calendar.Plo
mv -f .deps/basetime.Tpo .deps/basetime.Plo
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT cdf_lazy_grid.lo -MD -MP -MF .deps/cdf_lazy_grid.Tpo -c cdf_lazy_grid.c -o cdf_lazy_grid.o >/dev/null 2>&1
mv -f .deps/binary.Tpo .deps/binary.Plo
mv -f .deps/async_worker.Tpo .deps/async_worker.Plo
mv -f .deps/cdf.Tpo .deps/cdf.Plo
libtool: compile:  mpicc -DHAVE_CONFIG_H -I. -I/work/mh0287/m300488/libcdi-ci-sw/install/ppm-1.0.8-gcc-11.2.0/include -I/work/mh0287/m300488/libcdi-ci-sw/install/yaxt-0.9.3-gcc-11.2.0/include -DUSE_MPI -I/sw/spack-levante/netcdf-c-4.8.1-6qheqr/include -I/sw/spack-levante/eccodes-2.21.0-4ywkk4/include -DgFortran -DgFortran8 -g -O2 -pthread -Wall -Werror -MT cdf_int.lo -MD -MP -MF .deps/cdf_int.Tpo -c cdf_int.c -o cdf_int.o >/dev/null 2>&1
mv -f .deps/cdf_lazy_grid.Tpo .deps/cdf_lazy_grid.Plo
mv -f .deps/cdf_int.Tpo .deps/cdf_int.Plo
make[2]: Leaving directory '/scratch/hpc-ci/m214003/static/00701120/mpim-sw/libcdi/src'
make[1]: *** [Makefile:758: all] Error 2
make[1]: Leaving directory '/scratch/hpc-ci/m214003/static/00701120/mpim-sw/libcdi/src'
make: *** [Makefile:538: all-recursive] Error 1
Slurm job ci-701120_1742807722 state: FAILED
Error encountered during job: job failed with exit code: 1
Error encountered during job: Error executing run_exec: exit status 1
section_end:1742807829:step_script
section_start:1742807829:cleanup_file_variables
Cleaning up project directory and file based variables
section_end:1742807829:cleanup_file_variables
ERROR: Job failed: exit status 1