diff --git a/.ci/bb/breeze-mpim/init.sh b/.ci/bb/breeze-mpim/init.sh
index beb5dfdd6b2a3ebcafda4780fcaf1c9f45e1bb11..599395b35b523fc6b3dc9664c748e44cfe638834 100644
--- a/.ci/bb/breeze-mpim/init.sh
+++ b/.ci/bb/breeze-mpim/init.sh
@@ -9,18 +9,6 @@ init_env ()
   switch_for_module automake autoconf libtool swig ruby python
 }
 
-#
-# Initializes the Debian libtool
-init_debian_libtool ()
-{
-  export PATH="/usr/bin:${PATH-}"
-  export ACLOCAL_PATH="/usr/share/aclocal:${ACLOCAL_PATH-}"
-
-  # Prepend ACLOCAL_PATH with the path to Automake:
-  module unload automake
-  switch_for_module automake
-}
-
 #
 # Sets variables for tests with GCC.
 #
diff --git a/.ci/bb/breeze-mpim/test.all.nv b/.ci/bb/breeze-mpim/test.all.nv
index 4025ba7b5c2e8294d342e52efc9af9b294c1c34b..51ed408bc76906299307755c461558a3ac507fda 100755
--- a/.ci/bb/breeze-mpim/test.all.nv
+++ b/.ci/bb/breeze-mpim/test.all.nv
@@ -11,15 +11,12 @@ init_nvhpc
 
 enable_maintainer_mode='no'
 if test ! -f "${top_srcdir}/configure"; then
+  "${top_srcdir}/autogen.sh"
   # If there is no configure script, there are, most probably, no Fortran
   # interface files, which are generated in the maintainer mode only:
   enable_maintainer_mode='yes'
 fi
 
-# We want to check with the Debian version of Libtool, which is patched to avoid
-# overlinking:
-( init_debian_libtool; "${top_srcdir}/autogen.sh" )
-
 "${top_srcdir}/configure" \
 --enable-cf-interface \
 --enable-iso-c-interface \