From 26bec33642cffa3e7910c2f3c3528978c47f3319 Mon Sep 17 00:00:00 2001
From: Ralf Mueller <ralf.mueller@dkrz.de>
Date: Fri, 22 Feb 2019 15:48:54 +0100
Subject: [PATCH] add 2 more w/o debugging (intel16-impi)
---
config/default-mpi | 81 ++++++++++++++++++++++++++++++++++++++++------
1 file changed, 71 insertions(+), 10 deletions(-)
diff --git a/config/default-mpi b/config/default-mpi
index 2e984a27e..43b86d49b 100755
--- a/config/default-mpi
+++ b/config/default-mpi
@@ -1,7 +1,7 @@
#! /usr/bin/env bash
#
# default configuration options and compiler flags for different hosts
-LIBSDIR=/work/k20200/k202125/opt/libs
+CDI_SRC=${CDI_SRC:-.}
#
module purge
@@ -28,13 +28,14 @@ echo "SETUP:${SETUP}"
#
case "${HOSTNAME}" in
mlogin*)
+ SWROOT=/sw/rhel6-x64
+ LIBSDIR=/work/k20200/k202125/opt/libs
case "${SETUP}" in
gcc7-openmpi202p2)
SPACKENV_SH=/work/k20200/k202125/src/spack/share/spack/setup-env.sh;
SPACKENV_CSH=/work/k20200/k202125/src/spack/share/spack/setup-env.sh;
if test "x${SHELL}" = 'xtcsh'; then source ${SPACKENV_CSH}; else source ${SPACKENV_SH}; fi;
- CDI_SRC=${CDI_SRC:-.}
spack load -r /ochh3qn;
spack load -r /u7pouu7;
spack load -r /cyq76so;
@@ -51,7 +52,8 @@ case "${HOSTNAME}" in
F77=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/gcc-7.1.0/openmpi-2.0.2p3-qigwpmjhtg443dv3lpkivhqq3xnqecbu/bin/mpif90 \
MPI_LAUNCH=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/gcc-7.1.0/openmpi-2.0.2p3-qigwpmjhtg443dv3lpkivhqq3xnqecbu/bin/mpirun \
PKG_CONFIG_PATH=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/gcc-7.1.0/ppm-1.0.5p1-mbebe2mmgb2ov7epwh26d7pmsdscthzd/lib/pkgconfig:/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/gcc-7.1.0/yaxt-0.6.0-jo7fx5yoera7exefxchgnevnncpm42sh/lib/pkgconfig
- make && make check
+
+ make && make check
;;
intel16-openmpi202p2)
@@ -72,13 +74,9 @@ case "${HOSTNAME}" in
export PKG_CONFIG_PATH="${SCALES_PPM_DIR}/lib/pkgconfig:${YAXT_DIR}/lib/pkgconfig${PKG_CONFIG_PATH+:$PKG_CONFIG_PATH}"
export ROMIO_HINTS="${SRC_DIR}/bullxmpi-lustre-fail-workaround-romio-hints.txt"
-
-
module purge
module load intel/16.0 openmpi/2.0.2p2_hpcx-intel14
-
- CDI_SRC=${CDI_SRC:-.}
${CDI_SRC}/configure CC=mpicc \
CFLAGS="-g -fp-model precise -fno-math-errno -march=native" \
CPPFLAGS=-I/usr/include/jasper \
@@ -98,6 +96,7 @@ case "${HOSTNAME}" in
--with-jasper \
--enable-iso-c-interface \
--prefix=$INST_DIR
+
make && make check
;;
intel18-mpich)
@@ -106,7 +105,6 @@ case "${HOSTNAME}" in
SPACKENV_CSH=/work/k20200/k202125/src/spack/share/spack/setup-env.sh;
if test "x${SHELL}" = 'xtcsh'; then source ${SPACKENV_CSH}; else source ${SPACKENV_SH}; fi;
spack load -r /wqvrvlb;
- CDI_SRC=${CDI_SRC:-.}
${CDI_SRC}/configure --prefix=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/libcdi-1.8.2-wqvrvlbo5q3lxcyuq36odlwogrri6uag --enable-service --enable-extra --enable-ieg --disable-hirlam-extensions --disable-swig --disable-ruby --disable-python --with-netcdf=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/netcdf-4.6.2-beu3hwjpmhvmf6zjqdtoadixhdemezhg --with-threads LIBS=-leccodes --with-grib_api --enable-cgribex --without-szlib --enable-iso-c-interface --enable-cf-interface --enable-mpi CC=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/mpich-3.3-fzigj77tiugsgcbcf7giumn3imruzpo5/bin/mpicc FC=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/mpich-3.3-fzigj77tiugsgcbcf7giumn3imruzpo5/bin/mpif90 F77=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/mpich-3.3-fzigj77tiugsgcbcf7giumn3imruzpo5/bin/mpif90 MPI_LAUNCH=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/mpich-3.3-fzigj77tiugsgcbcf7giumn3imruzpo5/bin/mpirun PKG_CONFIG_PATH=/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/ppm-1.0.5p1-bvwppx2rch3eks365jc4md3awjvrwgid/lib/pkgconfig:/work/k20200/k202125/opt/spack/linux-rhel6-x86_64/intel-18.0.2/yaxt-0.6.0-ok2texrlbqufde6ledr55chstqipkinw/lib/pkgconfig
make && make check
;;
@@ -155,7 +153,6 @@ case "${HOSTNAME}" in
s/^ *//')"
CONFIG_SHELL=/bin/bash
- CDI_SRC=${CDI_SRC:-.}
LIBSDIR='/work/k20200/k202125/opt/libs'
export PKG_CONFIG_PATH="${LIBSDIR}/yaxt-${os}-${compiler}-${mpi}/lib/pkgconfig:${LIBSDIR}/ppm-${os}-${compiler}-${mpi}/lib/pkgconfig${PKG_CONFIG_PATH+:$PKG_CONFIG_PATH}"
${CDI_SRC}/configure \
@@ -180,6 +177,7 @@ case "${HOSTNAME}" in
LIBS="-lcurl -luuid" \
BUILD_CFLAGS="-Wall -Wextra -Werror -Wno-error=unused-function" \
LDFLAGS="${LDOPTFLAGS}"
+
make && make check
;;
nag-openmpi202p2)
@@ -226,7 +224,7 @@ case "${HOSTNAME}" in
CONFIG_SHELL=/bin/bash
export PKG_CONFIG_PATH="${LIBSDIR}/opt/yaxt-${os}-${compiler}-${mpi}/lib/pkgconfig:${LIBSDIR}/opt/ppm-${os}-${compiler}-${mpi}/lib/pkgconfig${PKG_CONFIG_PATH+:$PKG_CONFIG_PATH}"
echo $PKG_CON
- ./configure \
+ ${CDI_SRC}/configure \
--disable-shared \
--with-grib_api=/sw/rhel6-x64/grib_api/grib_api-1.15.0-gcc48 \
--with-netcdf=/sw/rhel6-x64/netcdf/netcdf_c-4.4.0-static-gcc48 \
@@ -250,6 +248,69 @@ case "${HOSTNAME}" in
make && make check
+ ;;
+ intel16-impi512)
+ os=x64-linux
+ compiler=intel16
+ mpi=impi5.1.2
+ GRIB_API_ROOT="${SWROOT}/grib_api/grib_api-1.13.0-gcc48"
+ SZIP_ROOT="${SWROOT}/sys/libaec-0.3.2-gcc48"
+ NETCDF_C_ROOT="${SWROOT}/netcdf/netcdf_c-4.3.2-gcc48"
+ HDF5_ROOT="${SWROOT}/hdf5/hdf5-1.8.14-threadsafe-gcc48"
+ export PKG_CONFIG_PATH="${LIBSDIR}/opt/ppm-${os}-${compiler}-${mpi}/lib/pkgconfig:${LIBSDIR}/opt/yaxt-${os}-${compiler}-${mpi}/lib/pkgconfig${PKG_CONFIG_PATH+:$PKG_CONFIG_PATH}"
+ ${CDI_SRC}/cdi/configure \
+ CC=mpiicc \
+ CFLAGS="-g -O3 -fp-model precise -fno-math-errno -march=native" \
+ CPPFLAGS="-I/usr/include/jasper" \
+ FC=mpiifort \
+ F77=mpiifort \
+ FCFLAGS="-g -O3 -fp-model precise -fno-math-errno -march=native" \
+ CXX=mpiicpc \
+ CXXFLAGS="-g -O3 -fp-model precise -fno-math-errno -march=native" \
+ LIBS="-lmpi_lustre -Wl,-rpath,${NETCDF_C_ROOT}/lib:${HDF5_ROOT}/lib:${PAR_NETCDF_ROOT+${PAR_NETCDF_ROOT}/lib:}${GRIB_API_ROOT}/lib:${SZIP_ROOT}/lib" \
+ MPI_LAUNCH="$(which srun) --propagate=STACK,CORE --exclusive" \
+ --enable-mpi \
+ --with-hdf5="${HDF5_ROOT}" \
+ --with-netcdf="${NETCDF_C_ROOT}" \
+ --with-szlib="${SZIP_ROOT}" \
+ --with-grib_api="${GRIB_API_ROOT}" \
+ --with-jasper \
+ --enable-iso-c-interface \
+ --prefix="$LIBSDIR/opt/cdi-${os}-${compiler}-${mpi}"
+
+ make && make check
+
+ ;;
+ intel16-impi512-debug)
+ os=x64-linux
+ compiler=intel16
+ mpi=impi5.1.2
+ GRIB_API_ROOT="${SWROOT}/grib_api/grib_api-1.13.0-gcc48"
+ SZIP_ROOT="${SWROOT}/sys/libaec-0.3.2-gcc48"
+ NETCDF_C_ROOT="${SWROOT}/netcdf/netcdf_c-4.3.2-gcc48"
+ HDF5_ROOT="${SWROOT}/hdf5/hdf5-1.8.14-threadsafe-gcc48"
+ export PKG_CONFIG_PATH="${LIBSDIR}/opt/ppm-${os}-${compiler}-${mpi}/lib/pkgconfig:${LIBSDIR}/opt/yaxt-${os}-${compiler}-${mpi}/lib/pkgconfig${PKG_CONFIG_PATH+:$PKG_CONFIG_PATH}"
+ ${CDI_SRC}/configure \
+ CC=mpiicc \
+ CFLAGS="-g -O0 -fp-model precise -fno-math-errno -march=native" \
+ CPPFLAGS="-I/usr/include/jasper" \
+ FC=mpiifort \
+ F77=mpiifort \
+ FCFLAGS="-g -O0 -fp-model precise -fno-math-errno -march=native" \
+ CXX=mpiicpc \
+ CXXFLAGS="-g -O0 -fp-model precise -fno-math-errno -march=native" \
+ LDFLAGS="-g" \
+ LIBS="-lmpi_lustre -Wl,-rpath,${NETCDF_C_ROOT}/lib:${HDF5_ROOT}/lib:${PAR_NETCDF_ROOT+${PAR_NETCDF_ROOT}/lib:}${GRIB_API_ROOT}/lib:${SZIP_ROOT}/lib" \
+ MPI_LAUNCH="$(which srun) --propagate=STACK,CORE --exclusive" \
+ --enable-mpi \
+ --with-hdf5="${HDF5_ROOT}" \
+ --with-netcdf="${NETCDF_C_ROOT}" \
+ --with-szlib="${SZIP_ROOT}" \
+ --with-grib_api="${GRIB_API_ROOT}" \
+ --with-jasper \
+ --enable-iso-c-interface
+
+ make && make check
;;
esac
;;
--
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