Fixed bug in png library test, specific for png14 not generic png.

.gitattributes

@@ -183,6 +183,7 @@ src/cfortran.doc -text
 src/cfortran.h -text
 src/cgribex.h -text
 src/cgribexlib.c -text
+src/config.h -text
 src/config.h.in -text
 src/datetime.h -text
 src/dmemory.c -text

Makefile.in

-# Makefile.in generated by automake 1.11.5 from Makefile.am.
+# Makefile.in generated by automake 1.12.3 from Makefile.am.
 # @configure_input@
 
-# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011 Free Software
-# Foundation, Inc.
+# Copyright (C) 1994-2012 Free Software Foundation, Inc.
+
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -53,7 +52,12 @@ host_triplet = @host@
 subdir = .
 DIST_COMMON = README $(am__configure_deps) $(srcdir)/Makefile.am \
 	$(srcdir)/Makefile.in $(srcdir)/cdi.settings.in \
-	$(top_srcdir)/configure $(top_srcdir)/src/pkgconfig/cdi.pc.in \
+	$(top_srcdir)/config/config.guess \
+	$(top_srcdir)/config/config.sub \
+	$(top_srcdir)/config/install-sh $(top_srcdir)/config/ltmain.sh \
+	$(top_srcdir)/config/missing \
+	$(top_srcdir)/config/mkinstalldirs $(top_srcdir)/configure \
+	$(top_srcdir)/src/pkgconfig/cdi.pc.in \
 	$(top_srcdir)/util/serialrun.in AUTHORS COPYING ChangeLog \
 	INSTALL NEWS config/compile config/config.guess \
 	config/config.sub config/depcomp config/install-sh \
@@ -97,9 +101,10 @@ RECURSIVE_CLEAN_TARGETS = mostlyclean-recursive clean-recursive	\
   distclean-recursive maintainer-clean-recursive
 AM_RECURSIVE_TARGETS = $(RECURSIVE_TARGETS:-recursive=) \
 	$(RECURSIVE_CLEAN_TARGETS:-recursive=) tags TAGS ctags CTAGS \
-	distdir dist dist-all distcheck
+	cscope distdir dist dist-all distcheck
 ETAGS = etags
 CTAGS = ctags
+CSCOPE = cscope
 DIST_SUBDIRS = $(SUBDIRS)
 DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 distdir = $(PACKAGE)-$(VERSION)
@@ -110,6 +115,7 @@ am__remove_distdir = \
       && rm -rf "$(distdir)" \
       || { sleep 5 && rm -rf "$(distdir)"; }; \
   else :; fi
+am__post_remove_distdir = $(am__remove_distdir)
 am__relativize = \
   dir0=`pwd`; \
   sed_first='s,^\([^/]*\)/.*$$,\1,'; \
@@ -137,6 +143,7 @@ am__relativize = \
   reldir="$$dir2"
 DIST_ARCHIVES = $(distdir).tar.gz
 GZIP_ENV = --best
+DIST_TARGETS = dist-gzip
 distuninstallcheck_listfiles = find . -type f -print
 am__distuninstallcheck_listfiles = $(distuninstallcheck_listfiles) \
   | sed 's|^\./|$(prefix)/|' | grep -v '$(infodir)/dir$$'
@@ -386,12 +393,12 @@ distclean-libtool:
 	-rm -f libtool config.lt
 
 # This directory's subdirectories are mostly independent; you can cd
-# into them and run `make' without going through this Makefile.
-# To change the values of `make' variables: instead of editing Makefiles,
-# (1) if the variable is set in `config.status', edit `config.status'
-#     (which will cause the Makefiles to be regenerated when you run `make');
-# (2) otherwise, pass the desired values on the `make' command line.
-$(RECURSIVE_TARGETS):
+# into them and run 'make' without going through this Makefile.
+# To change the values of 'make' variables: instead of editing Makefiles,
+# (1) if the variable is set in 'config.status', edit 'config.status'
+#     (which will cause the Makefiles to be regenerated when you run 'make');
+# (2) otherwise, pass the desired values on the 'make' command line.
+$(RECURSIVE_TARGETS) $(RECURSIVE_CLEAN_TARGETS):
 	@fail= failcom='exit 1'; \
 	for f in x $$MAKEFLAGS; do \
 	  case $$f in \
@@ -401,7 +408,11 @@ $(RECURSIVE_TARGETS):
 	done; \
 	dot_seen=no; \
 	target=`echo $@ | sed s/-recursive//`; \
-	list='$(SUBDIRS)'; for subdir in $$list; do \
+	case "$@" in \
+	  distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
+	  *) list='$(SUBDIRS)' ;; \
+	esac; \
+	for subdir in $$list; do \
 	  echo "Making $$target in $$subdir"; \
 	  if test "$$subdir" = "."; then \
 	    dot_seen=yes; \
@@ -415,37 +426,6 @@ $(RECURSIVE_TARGETS):
 	if test "$$dot_seen" = "no"; then \
 	  $(MAKE) $(AM_MAKEFLAGS) "$$target-am" || exit 1; \
 	fi; test -z "$$fail"
-
-$(RECURSIVE_CLEAN_TARGETS):
-	@fail= failcom='exit 1'; \
-	for f in x $$MAKEFLAGS; do \
-	  case $$f in \
-	    *=* | --[!k]*);; \
-	    *k*) failcom='fail=yes';; \
-	  esac; \
-	done; \
-	dot_seen=no; \
-	case "$@" in \
-	  distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
-	  *) list='$(SUBDIRS)' ;; \
-	esac; \
-	rev=''; for subdir in $$list; do \
-	  if test "$$subdir" = "."; then :; else \
-	    rev="$$subdir $$rev"; \
-	  fi; \
-	done; \
-	rev="$$rev ."; \
-	target=`echo $@ | sed s/-recursive//`; \
-	for subdir in $$rev; do \
-	  echo "Making $$target in $$subdir"; \
-	  if test "$$subdir" = "."; then \
-	    local_target="$$target-am"; \
-	  else \
-	    local_target="$$target"; \
-	  fi; \
-	  ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
-	  || eval $$failcom; \
-	done && test -z "$$fail"
 tags-recursive:
 	list='$(SUBDIRS)'; for subdir in $$list; do \
 	  test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) tags); \
@@ -454,6 +434,10 @@ ctags-recursive:
 	list='$(SUBDIRS)'; for subdir in $$list; do \
 	  test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) ctags); \
 	done
+cscopelist-recursive:
+	list='$(SUBDIRS)'; for subdir in $$list; do \
+	  test "$$subdir" = . || ($(am__cd) $$subdir && $(MAKE) $(AM_MAKEFLAGS) cscopelist); \
+	done
 
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
@@ -517,8 +501,32 @@ GTAGS:
 	  && $(am__cd) $(top_srcdir) \
 	  && gtags -i $(GTAGS_ARGS) "$$here"
 
+cscope: cscope.files
+	test ! -s cscope.files \
+	  || $(CSCOPE) -b -q $(AM_CSCOPEFLAGS) $(CSCOPEFLAGS) -i cscope.files $(CSCOPE_ARGS)
+
+clean-cscope:
+	-rm -f cscope.files
+
+cscope.files: clean-cscope cscopelist-recursive cscopelist
+
+cscopelist: cscopelist-recursive $(HEADERS) $(SOURCES) $(LISP)
+	list='$(SOURCES) $(HEADERS) $(LISP)'; \
+	case "$(srcdir)" in \
+	  [\\/]* | ?:[\\/]*) sdir="$(srcdir)" ;; \
+	  *) sdir=$(subdir)/$(srcdir) ;; \
+	esac; \
+	for i in $$list; do \
+	  if test -f "$$i"; then \
+	    echo "$(subdir)/$$i"; \
+	  else \
+	    echo "$$sdir/$$i"; \
+	  fi; \
+	done >> $(top_builddir)/cscope.files
+
 distclean-tags:
 	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
+	-rm -f cscope.out cscope.in.out cscope.po.out cscope.files
 
 distdir: $(DISTFILES)
 	$(am__remove_distdir)
@@ -586,40 +594,36 @@ distdir: $(DISTFILES)
 	|| chmod -R a+r "$(distdir)"
 dist-gzip: distdir
 	tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 
 dist-bzip2: distdir
 	tardir=$(distdir) && $(am__tar) | BZIP2=$${BZIP2--9} bzip2 -c >$(distdir).tar.bz2
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 
 dist-lzip: distdir
 	tardir=$(distdir) && $(am__tar) | lzip -c $${LZIP_OPT--9} >$(distdir).tar.lz
-	$(am__remove_distdir)
-
-dist-lzma: distdir
-	tardir=$(distdir) && $(am__tar) | lzma -9 -c >$(distdir).tar.lzma
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 
 dist-xz: distdir
 	tardir=$(distdir) && $(am__tar) | XZ_OPT=$${XZ_OPT--e} xz -c >$(distdir).tar.xz
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 
 dist-tarZ: distdir
 	tardir=$(distdir) && $(am__tar) | compress -c >$(distdir).tar.Z
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 
 dist-shar: distdir
 	shar $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).shar.gz
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 
 dist-zip: distdir
 	-rm -f $(distdir).zip
 	zip -rq $(distdir).zip $(distdir)
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 
-dist dist-all: distdir
-	tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
-	$(am__remove_distdir)
+dist dist-all:
+	$(MAKE) $(AM_MAKEFLAGS) $(DIST_TARGETS) am__post_remove_distdir='@:'
+	$(am__post_remove_distdir)
 
 # This target untars the dist file and tries a VPATH configuration.  Then
 # it guarantees that the distribution is self-contained by making another
@@ -630,8 +634,6 @@ distcheck: dist
 	  GZIP=$(GZIP_ENV) gzip -dc $(distdir).tar.gz | $(am__untar) ;;\
 	*.tar.bz2*) \
 	  bzip2 -dc $(distdir).tar.bz2 | $(am__untar) ;;\
-	*.tar.lzma*) \
-	  lzma -dc $(distdir).tar.lzma | $(am__untar) ;;\
 	*.tar.lz*) \
 	  lzip -dc $(distdir).tar.lz | $(am__untar) ;;\
 	*.tar.xz*) \
@@ -643,9 +645,9 @@ distcheck: dist
 	*.zip*) \
 	  unzip $(distdir).zip ;;\
 	esac
-	chmod -R a-w $(distdir); chmod a+w $(distdir)
-	mkdir $(distdir)/_build
-	mkdir $(distdir)/_inst
+	chmod -R a-w $(distdir)
+	chmod u+w $(distdir)
+	mkdir $(distdir)/_build $(distdir)/_inst
 	chmod a-w $(distdir)
 	test -d $(distdir)/_build || exit 0; \
 	dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
@@ -677,7 +679,7 @@ distcheck: dist
 	  && $(MAKE) $(AM_MAKEFLAGS) distcleancheck \
 	  && cd "$$am__cwd" \
 	  || exit 1
-	$(am__remove_distdir)
+	$(am__post_remove_distdir)
 	@(echo "$(distdir) archives ready for distribution: "; \
 	  list='$(DIST_ARCHIVES)'; for i in $$list; do echo $$i; done) | \
 	  sed -e 1h -e 1s/./=/g -e 1p -e 1x -e '$$p' -e '$$x'
@@ -813,13 +815,15 @@ ps-am:
 
 uninstall-am:
 
-.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) ctags-recursive \
-	install-am install-strip tags-recursive
+.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) \
+	cscopelist-recursive ctags-recursive install-am install-strip \
+	tags-recursive
 
 .PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \
-	all all-am am--refresh check check-am clean clean-generic \
-	clean-libtool ctags ctags-recursive dist dist-all dist-bzip2 \
-	dist-gzip dist-lzip dist-lzma dist-shar dist-tarZ dist-xz \
+	all all-am am--refresh check check-am clean clean-cscope \
+	clean-generic clean-libtool cscope cscopelist \
+	cscopelist-recursive ctags ctags-recursive dist dist-all \
+	dist-bzip2 dist-gzip dist-lzip dist-shar dist-tarZ dist-xz \
 	dist-zip distcheck distclean distclean-generic \
 	distclean-libtool distclean-tags distcleancheck distdir \
 	distuninstallcheck dvi dvi-am html html-am info info-am \

app/Makefile.in

-# Makefile.in generated by automake 1.11.5 from Makefile.am.
+# Makefile.in generated by automake 1.12.3 from Makefile.am.
 # @configure_input@
 
-# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011 Free Software
-# Foundation, Inc.
+# Copyright (C) 1994-2012 Free Software Foundation, Inc.
+
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -56,7 +55,9 @@ noinst_PROGRAMS = $(am__EXEEXT_2) createtable$(EXEEXT)
 @ENABLE_CDI_LIB_TRUE@am__append_1 = cdi
 @ENABLE_CDI_LIB_FALSE@am__append_2 = cdi
 subdir = app
-DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(top_srcdir)/config/depcomp \
+	$(top_srcdir)/config/mkinstalldirs
 ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
 am__aclocal_m4_deps =  \
 	$(top_srcdir)/m4/acx_assert_lang_is_fortran_variant.m4 \
@@ -482,6 +483,20 @@ GTAGS:
 	  && $(am__cd) $(top_srcdir) \
 	  && gtags -i $(GTAGS_ARGS) "$$here"
 
+cscopelist:  $(HEADERS) $(SOURCES) $(LISP)
+	list='$(SOURCES) $(HEADERS) $(LISP)'; \
+	case "$(srcdir)" in \
+	  [\\/]* | ?:[\\/]*) sdir="$(srcdir)" ;; \
+	  *) sdir=$(subdir)/$(srcdir) ;; \
+	esac; \
+	for i in $$list; do \
+	  if test -f "$$i"; then \
+	    echo "$(subdir)/$$i"; \
+	  else \
+	    echo "$$sdir/$$i"; \
+	  fi; \
+	done >> $(top_builddir)/cscope.files
+
 distclean-tags:
 	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
@@ -627,8 +642,8 @@ uninstall-am: uninstall-binPROGRAMS
 .MAKE: install-am install-strip
 
 .PHONY: CTAGS GTAGS all all-am check check-am clean clean-binPROGRAMS \
-	clean-generic clean-libtool clean-noinstPROGRAMS ctags \
-	distclean distclean-compile distclean-generic \
+	clean-generic clean-libtool clean-noinstPROGRAMS cscopelist \
+	ctags distclean distclean-compile distclean-generic \
 	distclean-libtool distclean-tags distdir dvi dvi-am html \
 	html-am info info-am install install-am install-binPROGRAMS \
 	install-data install-data-am install-dvi install-dvi-am \

config/ltmain.sh

 
-# libtool (GNU libtool) 2.4
+# libtool (GNU libtool) 2.4.2
 # Written by Gordon Matzigkeit <gord@gnu.ai.mit.edu>, 1996
 
 # Copyright (C) 1996, 1997, 1998, 1999, 2000, 2001, 2003, 2004, 2005, 2006,
-# 2007, 2008, 2009, 2010 Free Software Foundation, Inc.
+# 2007, 2008, 2009, 2010, 2011 Free Software Foundation, Inc.
 # This is free software; see the source for copying conditions.  There is NO
 # warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 
@@ -41,6 +41,7 @@
 #       --quiet, --silent    don't print informational messages
 #       --no-quiet, --no-silent
 #                            print informational messages (default)
+#       --no-warn            don't display warning messages
 #       --tag=TAG            use configuration variables from tag TAG
 #   -v, --verbose            print more informational messages than default
 #       --no-verbose         don't print the extra informational messages
@@ -69,7 +70,7 @@
 #         compiler:		$LTCC
 #         compiler flags:		$LTCFLAGS
 #         linker:		$LD (gnu? $with_gnu_ld)
-#         $progname:	(GNU libtool) 2.4
+#         $progname:	(GNU libtool) 2.4.2
 #         automake:	$automake_version
 #         autoconf:	$autoconf_version
 #
@@ -79,9 +80,9 @@
 
 PROGRAM=libtool
 PACKAGE=libtool
-VERSION=2.4
+VERSION=2.4.2
 TIMESTAMP=""
-package_revision=1.3293
+package_revision=1.3337
 
 # Be Bourne compatible
 if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
@@ -136,15 +137,10 @@ progpath="$0"
 
 : ${CP="cp -f"}
 test "${ECHO+set}" = set || ECHO=${as_echo-'printf %s\n'}
-: ${EGREP="grep -E"}
-: ${FGREP="grep -F"}
-: ${GREP="grep"}
-: ${LN_S="ln -s"}
 : ${MAKE="make"}
 : ${MKDIR="mkdir"}
 : ${MV="mv -f"}
 : ${RM="rm -f"}
-: ${SED="sed"}
 : ${SHELL="${CONFIG_SHELL-/bin/sh}"}
 : ${Xsed="$SED -e 1s/^X//"}
 
@@ -387,7 +383,7 @@ case $progpath in
      ;;
   *)
      save_IFS="$IFS"
-     IFS=:
+     IFS=${PATH_SEPARATOR-:}
      for progdir in $PATH; do
        IFS="$save_IFS"
        test -x "$progdir/$progname" && break
@@ -771,8 +767,8 @@ func_help ()
 	s*\$LTCFLAGS*'"$LTCFLAGS"'*
 	s*\$LD*'"$LD"'*
 	s/\$with_gnu_ld/'"$with_gnu_ld"'/
-	s/\$automake_version/'"`(automake --version) 2>/dev/null |$SED 1q`"'/
-	s/\$autoconf_version/'"`(autoconf --version) 2>/dev/null |$SED 1q`"'/
+	s/\$automake_version/'"`(${AUTOMAKE-automake} --version) 2>/dev/null |$SED 1q`"'/
+	s/\$autoconf_version/'"`(${AUTOCONF-autoconf} --version) 2>/dev/null |$SED 1q`"'/
 	p
 	d
      }
@@ -1052,6 +1048,7 @@ opt_finish=false
 opt_help=false
 opt_help_all=false
 opt_silent=:
+opt_warning=:
 opt_verbose=:
 opt_silent=false
 opt_verbose=false
@@ -1118,6 +1115,10 @@ esac
 			;;
       --no-silent|--no-quiet)
 			opt_silent=false
+func_append preserve_args " $opt"
+			;;
+      --no-warning|--no-warn)
+			opt_warning=false
 func_append preserve_args " $opt"
 			;;
       --no-verbose)
@@ -2059,7 +2060,7 @@ func_mode_compile ()
     *.[cCFSifmso] | \
     *.ada | *.adb | *.ads | *.asm | \
     *.c++ | *.cc | *.ii | *.class | *.cpp | *.cxx | \
-    *.[fF][09]? | *.for | *.java | *.obj | *.sx | *.cu | *.cup)
+    *.[fF][09]? | *.for | *.java | *.go | *.obj | *.sx | *.cu | *.cup)
       func_xform "$libobj"
       libobj=$func_xform_result
       ;;
@@ -3201,11 +3202,13 @@ func_mode_install ()
 
       # Set up the ranlib parameters.
       oldlib="$destdir/$name"
+      func_to_tool_file "$oldlib" func_convert_file_msys_to_w32
+      tool_oldlib=$func_to_tool_file_result
 
       func_show_eval "$install_prog \$file \$oldlib" 'exit $?'
 
       if test -n "$stripme" && test -n "$old_striplib"; then
-	func_show_eval "$old_striplib $oldlib" 'exit $?'
+	func_show_eval "$old_striplib $tool_oldlib" 'exit $?'
       fi
 
       # Do each command in the postinstall commands.
@@ -3470,7 +3473,7 @@ static const void *lt_preloaded_setup() {
 	  # linked before any other PIC object.  But we must not use
 	  # pic_flag when linking with -static.  The problem exists in
 	  # FreeBSD 2.2.6 and is fixed in FreeBSD 3.1.
-	  *-*-freebsd2*|*-*-freebsd3.0*|*-*-freebsdelf3.0*)
+	  *-*-freebsd2.*|*-*-freebsd3.0*|*-*-freebsdelf3.0*)
 	    pic_flag_for_symtable=" $pic_flag -DFREEBSD_WORKAROUND" ;;
 	  *-*-hpux*)
 	    pic_flag_for_symtable=" $pic_flag"  ;;
@@ -3982,14 +3985,17 @@ func_exec_program_core ()
 # launches target application with the remaining arguments.
 func_exec_program ()
 {
-  for lt_wr_arg
-  do
-    case \$lt_wr_arg in
-    --lt-*) ;;
-    *) set x \"\$@\" \"\$lt_wr_arg\"; shift;;
-    esac
-    shift
-  done
+  case \" \$* \" in
+  *\\ --lt-*)
+    for lt_wr_arg
+    do
+      case \$lt_wr_arg in
+      --lt-*) ;;
+      *) set x \"\$@\" \"\$lt_wr_arg\"; shift;;
+      esac
+      shift
+    done ;;
+  esac
   func_exec_program_core \${1+\"\$@\"}
 }
 
@@ -5057,9 +5063,15 @@ void lt_dump_script (FILE* f)
 {
 EOF
 	    func_emit_wrapper yes |
-              $SED -e 's/\([\\"]\)/\\\1/g' \
-	           -e 's/^/  fputs ("/' -e 's/$/\\n", f);/'
-
+	      $SED -n -e '
+s/^\(.\{79\}\)\(..*\)/\1\
+\2/
+h
+s/\([\\"]\)/\\\1/g
+s/$/\\n/
+s/\([^\n]*\).*/  fputs ("\1", f);/p
+g
+D'
             cat <<"EOF"
 }
 EOF
@@ -5643,7 +5655,8 @@ func_mode_link ()
 	continue
 	;;
 
-      -mt|-mthreads|-kthread|-Kthread|-pthread|-pthreads|--thread-safe|-threads)
+      -mt|-mthreads|-kthread|-Kthread|-pthread|-pthreads|--thread-safe \
+      |-threads|-fopenmp|-openmp|-mp|-xopenmp|-omp|-qsmp=*)
 	func_append compiler_flags " $arg"
 	func_append compile_command " $arg"
 	func_append finalize_command " $arg"
@@ -5838,9 +5851,10 @@ func_mode_link ()
       # -tp=*                Portland pgcc target processor selection
       # --sysroot=*          for sysroot support
       # -O*, -flto*, -fwhopr*, -fuse-linker-plugin GCC link-time optimization
+      # -stdlib=*            select c++ std lib with clang
       -64|-mips[0-9]|-r[0-9][0-9]*|-xarch=*|-xtarget=*|+DA*|+DD*|-q*|-m*| \
       -t[45]*|-txscale*|-p|-pg|--coverage|-fprofile-*|-F*|@*|-tp=*|--sysroot=*| \
-      -O*|-flto*|-fwhopr*|-fuse-linker-plugin)
+      -O*|-flto*|-fwhopr*|-fuse-linker-plugin|-stdlib=*)
         func_quote_for_eval "$arg"
 	arg="$func_quote_for_eval_result"
         func_append compile_command " $arg"
@@ -6147,7 +6161,8 @@ func_mode_link ()
 	lib=
 	found=no
 	case $deplib in
-	-mt|-mthreads|-kthread|-Kthread|-pthread|-pthreads|--thread-safe|-threads)
+	-mt|-mthreads|-kthread|-Kthread|-pthread|-pthreads|--thread-safe \
+        |-threads|-fopenmp|-openmp|-mp|-xopenmp|-omp|-qsmp=*)
 	  if test "$linkmode,$pass" = "prog,link"; then
 	    compile_deplibs="$deplib $compile_deplibs"
 	    finalize_deplibs="$deplib $finalize_deplibs"
@@ -6831,7 +6846,7 @@ func_mode_link ()
 	         test "$hardcode_direct_absolute" = no; then
 		add="$dir/$linklib"
 	      elif test "$hardcode_minus_L" = yes; then
-		add_dir="-L$dir"
+		add_dir="-L$absdir"
 		# Try looking first in the location we're being installed to.
 		if test -n "$inst_prefix_dir"; then
 		  case $libdir in
@@ -7316,6 +7331,7 @@ func_mode_link ()
 	  # which has an extra 1 added just for fun
 	  #
 	  case $version_type in
+	  # correct linux to gnu/linux during the next big refactor
 	  darwin|linux|osf|windows|none)
 	    func_arith $number_major + $number_minor
 	    current=$func_arith_result
@@ -7432,7 +7448,7 @@ func_mode_link ()
 	  versuffix="$major.$revision"
 	  ;;
 
-	linux)
+	linux) # correct to gnu/linux during the next big refactor
 	  func_arith $current - $age
 	  major=.$func_arith_result
 	  versuffix="$major.$age.$revision"
@@ -8020,6 +8036,11 @@ EOF
 
       # Test again, we may have decided not to build it any more
       if test "$build_libtool_libs" = yes; then
+	# Remove ${wl} instances when linking with ld.
+	# FIXME: should test the right _cmds variable.
+	case $archive_cmds in
+	  *\$LD\ *) wl= ;;
+        esac
 	if test "$hardcode_into_libs" = yes; then
 	  # Hardcode the library paths
 	  hardcode_libdirs=
@@ -8050,7 +8071,7 @@ EOF
 	    elif test -n "$runpath_var"; then
 	      case "$perm_rpath " in
 	      *" $libdir "*) ;;
-	      *) func_apped perm_rpath " $libdir" ;;
+	      *) func_append perm_rpath " $libdir" ;;
 	      esac
 	    fi
 	  done
@@ -8058,11 +8079,7 @@ EOF
 	  if test -n "$hardcode_libdir_separator" &&
 	     test -n "$hardcode_libdirs"; then
 	    libdir="$hardcode_libdirs"
-	    if test -n "$hardcode_libdir_flag_spec_ld"; then
-	      eval dep_rpath=\"$hardcode_libdir_flag_spec_ld\"
-	    else
-	      eval dep_rpath=\"$hardcode_libdir_flag_spec\"
-	    fi
+	    eval "dep_rpath=\"$hardcode_libdir_flag_spec\""
 	  fi
 	  if test -n "$runpath_var" && test -n "$perm_rpath"; then
 	    # We should set the runpath_var.
@@ -9152,6 +9169,8 @@ EOF
 	    esac
 	  done
 	fi
+	func_to_tool_file "$oldlib" func_convert_file_msys_to_w32
+	tool_oldlib=$func_to_tool_file_result
 	eval cmds=\"$old_archive_cmds\"
 
 	func_len " $cmds"
@@ -9261,7 +9280,8 @@ EOF
 	      *.la)
 		func_basename "$deplib"
 		name="$func_basename_result"
-		eval libdir=`${SED} -n -e 's/^libdir=\(.*\)$/\1/p' $deplib`
+		func_resolve_sysroot "$deplib"
+		eval libdir=`${SED} -n -e 's/^libdir=\(.*\)$/\1/p' $func_resolve_sysroot_result`
 		test -z "$libdir" && \
 		  func_fatal_error "\`$deplib' is not a valid libtool archive"
 		func_append newdependency_libs " ${lt_sysroot:+=}$libdir/$name"

configure

@@ -1499,14 +1499,17 @@ Optional Features:
   --disable-option-checking  ignore unrecognized --enable/--with options
   --disable-FEATURE       do not include FEATURE (same as --enable-FEATURE=no)
   --enable-FEATURE[=ARG]  include FEATURE [ARG=yes]
-  --enable-maintainer-mode  enable make rules and dependencies not useful
-			  (and sometimes confusing) to the casual installer
+  --enable-maintainer-mode
+                          enable make rules and dependencies not useful (and
+                          sometimes confusing) to the casual installer
   --enable-shared[=PKGS]  build shared libraries [default=yes]
   --enable-static[=PKGS]  build static libraries [default=yes]
   --enable-fast-install[=PKGS]
                           optimize for fast installation [default=yes]
-  --disable-dependency-tracking  speeds up one-time build
-  --enable-dependency-tracking   do not reject slow dependency extractors
+  --enable-dependency-tracking
+                          do not reject slow dependency extractors
+  --disable-dependency-tracking
+                          speeds up one-time build
   --disable-libtool-lock  avoid locking (might break parallel builds)
   --disable-largefile     omit support for large files
   --enable-grib           GRIB support [default=yes]
@@ -2903,7 +2906,7 @@ _ACEOF
 SYSTEM_TYPE="$ac_cv_build"
-am__api_version='1.11'
+am__api_version='1.12'
 # Find a good install program.  We prefer a C program (faster),
 # so one script is as good as another.  But avoid the broken or
@@ -3000,9 +3003,6 @@ test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
 { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether build environment is sane" >&5
 $as_echo_n "checking whether build environment is sane... " >&6; }