Commit 78d9d423 authored by Ralf Mueller's avatar Ralf Mueller
Browse files

integrate MapReduce module

parents b696e63a 68c5bc5c
......@@ -200,6 +200,7 @@ doc/tex/mod/Invertlev -text
doc/tex/mod/Maggraph -text
doc/tex/mod/Magplot -text
doc/tex/mod/Magvector -text
doc/tex/mod/MapReduce -text
doc/tex/mod/Maskbox -text
doc/tex/mod/Maskregion -text
doc/tex/mod/Mastrfu -text
......@@ -417,6 +418,7 @@ src/Magplot.c -text
src/Magvector.c -text
src/Makefile.am -text
src/Makefile.in -text
src/MapReduce.c -text
src/Maskbox.c -text
src/Mastrfu.c -text
src/Math.c -text
......
# Makefile.in generated by automake 1.14 from Makefile.am.
# Makefile.in generated by automake 1.15 from Makefile.am.
# @configure_input@
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# Copyright (C) 1994-2014 Free Software Foundation, Inc.
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......@@ -14,7 +14,17 @@
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......@@ -78,19 +88,6 @@ POST_UNINSTALL = :
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host_triplet = @host@
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config/missing config/mkinstalldirs config/ltmain.sh \
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am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
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CTAGS = ctags
CSCOPE = cscope
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$(top_srcdir)/config/tap-driver.sh AUTHORS COPYING ChangeLog \
INSTALL NEWS README config/ar-lib config/compile \
config/config.guess config/config.sub config/depcomp \
config/install-sh config/ltmain.sh config/missing \
config/mkinstalldirs
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
distdir = $(PACKAGE)-$(VERSION)
top_distdir = $(distdir)
......@@ -404,7 +415,6 @@ $(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(am__confi
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$(am__post_remove_distdir)
dist-tarZ: distdir
@echo WARNING: "Support for shar distribution archives is" \
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shar $(distdir) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).shar.gz
$(am__post_remove_distdir)
......@@ -668,16 +678,17 @@ distcheck: dist
esac
chmod -R a-w $(distdir)
chmod u+w $(distdir)
mkdir $(distdir)/_build $(distdir)/_inst
mkdir $(distdir)/_build $(distdir)/_build/sub $(distdir)/_inst
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......@@ -854,6 +865,8 @@ uninstall-am:
mostlyclean mostlyclean-generic mostlyclean-libtool pdf pdf-am \
ps ps-am tags tags-am uninstall uninstall-am
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......
......@@ -99,6 +99,7 @@ Operator catalog:
Cond2 ifthenelse If then else
Condc ifthenc If then constant
Condc ifnotthenc If not then constant
MapReduce reducegrid Reduce input file variables to locations, where mask is non-zero.
-------------------------------------------------------------
Comparison
-------------------------------------------------------------
......
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# This file is free software; the Free Software Foundation
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......@@ -559,8 +558,8 @@ AC_REQUIRE([AC_PROG_MKDIR_P])dnl
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......@@ -633,7 +632,11 @@ to "yes", and re-run configure.
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#
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......@@ -683,7 +686,7 @@ if test x"${install_sh}" != xset; then
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AC_SUBST([install_sh])])
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......@@ -740,7 +743,7 @@ AC_MSG_CHECKING([whether to enable maintainer-specific portions of Makefiles])
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# Copyright (C) 2001-2014 Free Software Foundation, Inc.
#
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......@@ -790,7 +793,7 @@ rm -f confinc confmf
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......@@ -829,7 +832,7 @@ fi
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# gives unlimited permission to copy and/or distribute it,
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......@@ -924,7 +927,7 @@ AC_DEFUN([AM_RUN_LOG],
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......@@ -1005,7 +1008,7 @@ AC_CONFIG_COMMANDS_PRE(
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......@@ -1065,7 +1068,7 @@ AC_SUBST([AM_BACKSLASH])dnl
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......@@ -1093,7 +1096,7 @@ fi
INSTALL_STRIP_PROGRAM="\$(install_sh) -c -s"
AC_SUBST([INSTALL_STRIP_PROGRAM])])
# Copyright (C) 2006-2013 Free Software Foundation, Inc.
# Copyright (C) 2006-2014 Free Software Foundation, Inc.
#
# This file is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
......@@ -1112,7 +1115,7 @@ AC_DEFUN([AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE($@)])
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# gives unlimited permission to copy and/or distribute it,
......
This diff is collapsed.
# Makefile.in generated by automake 1.14 from Makefile.am.
# Makefile.in generated by automake 1.15 from Makefile.am.
# @configure_input@
# Copyright (C) 1994-2013 Free Software Foundation, Inc.
# Copyright (C) 1994-2014 Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
......@@ -14,7 +14,17 @@
@SET_MAKE@
VPATH = @srcdir@
am__is_gnu_make = test -n '$(MAKEFILE_LIST)' && test -n '$(MAKELEVEL)'
am__is_gnu_make = { \
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false; \
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am__make_running_with_option = \
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......@@ -79,8 +89,6 @@ build_triplet = @build@
host_triplet = @host@
@MAINTAINER_MODE_TRUE@am__append_1 = `ls cdoCompletion.*`
subdir = contrib
DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/Makefile.am \
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......@@ -89,6 +97,7 @@ am__aclocal_m4_deps = $(top_srcdir)/m4/acx_options.m4 \
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......@@ -305,7 +316,6 @@ $(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(am__confi
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......@@ -483,6 +493,8 @@ uninstall-am:
mostlyclean-libtool pdf pdf-am ps ps-am tags-am uninstall \
uninstall-am
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completions:
if (hash ruby &> /dev/null) ; then \
......
......@@ -21,6 +21,7 @@ Selbox Selection
Cond Conditional selection
Cond2 Conditional selection
Condc Conditional selection
MapReduce Conditional selection
Comp Comparison
Compc Comparison
Setpartab Modification
......
@BeginModule
@NewPage
@Name = MapReduce
@Title = Reduce fields to user-defined mask
@Section = Conditional selection
@Class = Conditional
@Arguments = ifile ofile
@Operators = reducegrid
@BeginDescription
This module holds an operator for data reduction based on a user defined mask.
The output grid is unstructured and includes coordinate bounds. Bounds can be
avoided by using the additional 'nobounds' keyword. With 'nocoords' given,
coordinates a completely suppressed.
@EndDescription
@EndModule
@BeginOperator_reducegrid
@Name = reducegrid
@Title = Reduce input file variables to locations, where mask is non-zero.
Horizontal grids of @file{mask} and @file{ifile} must be identical
@Parameter = mask[,limitCoordsOutput]
@EndOperator
@BeginParameter
@Item = mask
STRING file which holds the mask field
@Item = limitCoordsOutput
STRING optional parameter to limit coordinates output: 'nobounds' disables coordinate bounds, 'nocoords' avoids all coordinate information
@EndParameter
@BeginExample
To limit data fields to land values, a mask has to be created first with
@BeginVerbatim
cdo -gtc,0 -topo,ni96 lsm_gme96.grb
@EndVerbatim
Here a GME grid is used. Say @file{temp_gme96.grb} contains a global temperture field.
The following command limits the global grid to landpoints.
@BeginVerbatim
cdo -f nc reduce,lsm_gme96.grb temp_gme96.grb tempOnLand_gme96.nc
@EndVerbatim
Note that output file type is NetCDF, because unstructured grids cannot be stored in GRIB format.
@EndExample
@BeginOperator_expandgrid
@Name = expandgrid
@Title = Unpack input fields to given grid description - reverse operators of reducegrid
@Parameter = grid
@BeginDescription
Blowup the input fields towards given grid without changing the values
@EndDescription
@EndOperator
@BeginParameter
@Item = grid
STRING Target grid description file or name
@EndParameter
......@@ -249,6 +249,7 @@ cdo_SOURCES += Adisit.c \
Isosurface.c \
Kvl.c \
Log.c \
MapReduce.c \
Maskbox.c \
Mastrfu.c \
Math.c \
......
# Makefile.in generated by automake 1.14 from Makefile.am.
# Makefile.in generated by automake 1.15 from Makefile.am.
# @configure_input@
# Copyright (C) 1994-2013 Free Software Foundation, Inc.
# Copyright (C) 1994-2014 Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
......@@ -16,7 +16,17 @@
VPATH = @srcdir@
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......@@ -84,9 +94,6 @@ bin_PROGRAMS = cdo$(EXEEXT)
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@ENABLE_ALL_STATIC_TRUE@am__append_2 = -all-static
subdir = src
DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/Makefile.am \
$(srcdir)/config.h.in $(top_srcdir)/config/mkinstalldirs \
$(top_srcdir)/config/depcomp
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/m4/acx_options.m4 \
$(top_srcdir)/m4/ax_pthread.m4 $(top_srcdir)/m4/libtool.m4 \
......@@ -95,6 +102,7 @@ am__aclocal_m4_deps = $(top_srcdir)/m4/acx_options.m4 \
$(top_srcdir)/acinclude.m4 $(top_srcdir)/configure.ac
am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
$(ACLOCAL_M4)
DIST_COMMON = $(srcdir)/Makefile.am $(am__DIST_COMMON)
mkinstalldirs = $(SHELL) $(top_srcdir)/config/mkinstalldirs
CONFIG_HEADER = config.h
CONFIG_CLEAN_FILES =
......@@ -193,11 +201,12 @@ am_cdo_OBJECTS = cdo-cdo.$(OBJEXT) cdo-Adisit.$(OBJEXT) \
cdo-Intntime.$(OBJEXT) cdo-Inttime.$(OBJEXT) \
cdo-Intyear.$(OBJEXT) cdo-Invert.$(OBJEXT) \
cdo-Invertlev.$(OBJEXT) cdo-Isosurface.$(OBJEXT) \
cdo-Kvl.$(OBJEXT) cdo-Log.$(OBJEXT) cdo-Maskbox.$(OBJEXT) \
cdo-Mastrfu.$(OBJEXT) cdo-Math.$(OBJEXT) cdo-Merge.$(OBJEXT) \
cdo-Mergegrid.$(OBJEXT) cdo-Mergetime.$(OBJEXT) \
cdo-Merstat.$(OBJEXT) cdo-Monarith.$(OBJEXT) \
cdo-Mrotuv.$(OBJEXT) cdo-Mrotuvb.$(OBJEXT) cdo-Ninfo.$(OBJEXT) \
cdo-Kvl.$(OBJEXT) cdo-Log.$(OBJEXT) cdo-MapReduce.$(OBJEXT) \
cdo-Maskbox.$(OBJEXT) cdo-Mastrfu.$(OBJEXT) cdo-Math.$(OBJEXT) \
cdo-Merge.$(OBJEXT) cdo-Mergegrid.$(OBJEXT) \
cdo-Mergetime.$(OBJEXT) cdo-Merstat.$(OBJEXT) \
cdo-Monarith.$(OBJEXT) cdo-Mrotuv.$(OBJEXT) \
cdo-Mrotuvb.$(OBJEXT) cdo-Ninfo.$(OBJEXT) \
cdo-Nmltest.$(OBJEXT) cdo-Output.$(OBJEXT) \
cdo-Outputgmt.$(OBJEXT) cdo-Pack.$(OBJEXT) \
cdo-Pardup.$(OBJEXT) cdo-Pinfo.$(OBJEXT) \
......@@ -321,6 +330,9 @@ am__define_uniq_tagged_files = \
done | $(am__uniquify_input)`
ETAGS = etags
CTAGS = ctags
am__DIST_COMMON = $(srcdir)/Makefile.in $(srcdir)/config.h.in \
$(top_srcdir)/config/depcomp \
$(top_srcdir)/config/mkinstalldirs
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
ACLOCAL = @ACLOCAL@
AMTAR = @AMTAR@
......@@ -560,27 +572,28 @@ cdo_SOURCES = cdo.c Adisit.c Afterburner.c Arith.c Arithc.c \
Importcmsaf.c Importobs.c Info.c Input.c Intgrid.c \
Intgridtraj.c Intlevel.c Intlevel3d.c Intntime.c Inttime.c \
Intyear.c Invert.c Invertlev.c Isosurface.c Kvl.c Log.c \
Maskbox.c Mastrfu.c Math.c Merge.c Mergegrid.c Mergetime.c \
Merstat.c Monarith.c Mrotuv.c Mrotuvb.c Ninfo.c Nmltest.c \
Output.c Outputgmt.c Pack.c Pardup.c Pinfo.c Pressure.c \
Regres.c Remap.c Remapeta.c Replace.c Replacevalues.c Rhopot.c \
Rotuv.c Runpctl.c Runstat.c Seascount.c Seaspctl.c Seasstat.c \
Selbox.c Select.c Seloperator.c Selrec.c Seltime.c Selvar.c \
Set.c Setbox.c Setgatt.c Setgrid.c Sethalo.c Setmiss.c \
Setpartab.c Setrcaname.c Settime.c Setzaxis.c Showinfo.c \
Sinfo.c Smooth.c Sort.c Sorttimestamp.c Specinfo.c Spectral.c \
Spectrum.c Split.c Splitrec.c Splitsel.c Splittime.c \
Splityear.c SSOpar.c Subtrend.c Tee.c Templates.c Test.c \
Tests.c Timedt.c Timcount.c Timpctl.c Timselpctl.c \
Timselstat.c Timsort.c Timstat.c Timstat2.c Timstat3.c Tinfo.c \
Tocomplex.c Transpose.c Trend.c Trms.c Tstepcount.c Vargen.c \
Varrms.c Vertintml.c Vertintap.c Vertstat.c Vertcum.c \
Vertwind.c Verifygrid.c Wct.c Wind.c Writegrid.c Writerandom.c \
XTimstat.c YAR.c Yearmonstat.c Ydayarith.c Ydaypctl.c \
Ydaystat.c Ydrunpctl.c Ydrunstat.c Yhourarith.c Yhourstat.c \
Ymonarith.c Ymonpctl.c Ymonstat.c Yseaspctl.c Yseasstat.c \
Zonstat.c cdo.h nearpt3c.h Magplot.c Magvector.c Maggraph.c \
template_parser.h template_parser.c results_template_parser.h \
MapReduce.c Maskbox.c Mastrfu.c Math.c Merge.c Mergegrid.c \
Mergetime.c Merstat.c Monarith.c Mrotuv.c Mrotuvb.c Ninfo.c \
Nmltest.c Output.c Outputgmt.c Pack.c Pardup.c Pinfo.c \
Pressure.c Regres.c Remap.c Remapeta.c Replace.c \
Replacevalues.c Rhopot.c Rotuv.c Runpctl.c Runstat.c \
Seascount.c Seaspctl.c Seasstat.c Selbox.c Select.c \
Seloperator.c Selrec.c Seltime.c Selvar.c Set.c Setbox.c \
Setgatt.c Setgrid.c Sethalo.c Setmiss.c Setpartab.c \
Setrcaname.c Settime.c Setzaxis.c Showinfo.c Sinfo.c Smooth.c \
Sort.c Sorttimestamp.c Specinfo.c Spectral.c Spectrum.c \
Split.c Splitrec.c Splitsel.c Splittime.c Splityear.c SSOpar.c \
Subtrend.c Tee.c Templates.c Test.c Tests.c Timedt.c \
Timcount.c Timpctl.c Timselpctl.c Timselstat.c Timsort.c \
Timstat.c Timstat2.c Timstat3.c Tinfo.c Tocomplex.c \
Transpose.c Trend.c Trms.c Tstepcount.c Vargen.c Varrms.c \
Vertintml.c Vertintap.c Vertstat.c Vertcum.c Vertwind.c \