[0KRunning with gitlab-runner 17.8.3 (690ce25c)[0;m
[0K on slurm instance runner t1_2Gof3y, system ID: s_3b9487865d15[0;m
section_start:1738233102:prepare_executor
[0K[0K[36;1mPreparing the "custom" executor[0;m[0;m
[0KUsing Custom executor with driver Jacamar CI 0.21.0...[0;m
section_end:1738233105:prepare_executor
[0Ksection_start:1738233105:prepare_script
[0K[0K[36;1mPreparing environment[0;m[0;m
Targeting sbatch executor
Static builds directory in use, all jobs results kept. Please be aware of large disk space requirements when using this runner (minimum days: 1)
Running as k202187 UID: 250640 GID: 1567
Local time: 2025-01-30 11:31:46
Running on hpc-ci.dkrz.de via hpc-ci.dkrz.de...
section_end:1738233106:prepare_script
[0Ksection_start:1738233106:get_sources
[0K[0K[36;1mGetting source from Git repository[0;m[0;m
[32;1mFetching changes with git depth set to 20...[0;m
Initialized empty Git repository in /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/.git/
[32;1mCreated fresh repository.[0;m
[32;1mChecking out 72e1958e as detached HEAD (ref is main)...[0;m
[32;1mSkipping Git submodules setup[0;m
section_end:1738233118:get_sources
[0Ksection_start:1738233118:restore_cache
[0K[0K[36;1mRestoring cache[0;m[0;m
[32;1mChecking cache for default-non_protected...[0;m
Runtime platform [0;m arch[0;m=amd64 os[0;m=linux pid[0;m=1601743 revision[0;m=690ce25c version[0;m=17.8.3
No URL provided, cache will not be downloaded from shared cache server. Instead a local version of cache will be extracted.[0;m
[32;1mSuccessfully extracted cache[0;m
section_end:1738233123:restore_cache
[0Ksection_start:1738233123:step_script
[0K[0K[36;1mExecuting "step_script" stage of the job script[0;m[0;m
[0;33mWARNING: Starting with version 17.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/groups/gitlab-org/-/epics/6112[0;m
[32;1mSlurm job command: sbatch --wait --job-name=ci-604442_1738233124 --output=/scratch/hpc-ci/k202187/scripts/t1_2Gof3y/001/ch1187/plugins4freva/heat2urbanimpact/604442/slurm-ci-604442.out --account=ch1187 --partition=compute --mem=0 /scratch/hpc-ci/k202187/scripts/t1_2Gof3y/001/ch1187/plugins4freva/heat2urbanimpact/604442/build_script.bash[0;m
Submitted batch job 15055317
[32;1m$ module load clint regiklim-ces[0;m
[32;1m$ make mamba-dep-install[0;m
rm -fr build/
rm -fr dist/
rm -fr .eggs/
find . -name '*.egg-info' -exec rm -fr {} +
find . -name '*.egg' -exec rm -rf {} +
find . -name '*.pyc' -exec rm -f {} +
find . -name '*.pyo' -exec rm -f {} +
find . -name '*~' -exec rm -f {} +
find . -name '__pycache__' -exec rm -fr {} +
rm -fr .tox/
rm -f .coverage
rm -fr htmlcov/
rm -fr .pytest_cache
rm -rf venv
mamba env create --prefix ./plugin_env -f heat2urbanimpact-env.yml
Transaction
Prefix: /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env
Updating specs:
- python=3.10
- pip
- freva
- git-lfs
- python-swiftclient
- cdo
- conda
- ipykernel
- cftime
- nbconvert
- mamba
- cartopy
- geopandas
- matplotlib
- xarray
- pandas
- pint
- pint-xarray
- papermill
- metpy
- nc-time-axis
- cf_xarray
- dask
- regionmask==0.12.1
- shapely
- fiona
- h5netcdf
- netcdf4
- zarr
Package Version Build Channel Size
─────────────────────────────────────────────────────────────────────────────────────────────────────────
Install:
─────────────────────────────────────────────────────────────────────────────────────────────────────────
+ git-lfs 3.6.1 h59e48b9_0 conda-forge Cached
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+ pugixml 1.14 h59595ed_0 conda-forge Cached
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+ hurry.filesize 0.9 pyhd8ed1ab_2 conda-forge Cached
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+ truststore 0.10.0 pyhd8ed1ab_0 conda-forge Cached
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+ distro 1.9.0 pyhd8ed1ab_1 conda-forge Cached
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+ munkres 1.1.4 pyh9f0ad1d_0 conda-forge Cached
+ pyparsing 3.2.1 pyhd8ed1ab_0 conda-forge Cached
+ cycler 0.12.1 pyhd8ed1ab_1 conda-forge Cached
+ pytz 2024.1 pyhd8ed1ab_0 conda-forge Cached
+ python-tzdata 2025.1 pyhd8ed1ab_0 conda-forge Cached
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+ webencodings 0.5.1 pyhd8ed1ab_3 conda-forge Cached
+ fsspec 2024.12.0 pyhd8ed1ab_0 conda-forge Cached
+ zict 3.0.0 pyhd8ed1ab_1 conda-forge Cached
+ cloudpickle 3.1.1 pyhd8ed1ab_0 conda-forge Cached
+ tblib 3.0.0 pyhd8ed1ab_1 conda-forge Cached
+ sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge Cached
+ sqlparse 0.5.3 pyhd8ed1ab_0 conda-forge Cached
+ pymysql 1.1.1 pyhd8ed1ab_1 conda-forge Cached
+ toolz 1.0.0 pyhd8ed1ab_1 conda-forge Cached
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+ humanize 4.11.0 pyhd8ed1ab_1 conda-forge Cached
+ appdirs 1.4.4 pyhd8ed1ab_1 conda-forge Cached
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+ pkgutil-resolve-name 1.3.10 pyhd8ed1ab_2 conda-forge Cached
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+ traitlets 5.14.3 pyhd8ed1ab_1 conda-forge Cached
+ python-fastjsonschema 2.21.1 pyhd8ed1ab_0 conda-forge Cached
+ tenacity 9.0.0 pyhd8ed1ab_1 conda-forge Cached
+ entrypoints 0.4 pyhd8ed1ab_1 conda-forge Cached
+ click 8.1.8 pyh707e725_0 conda-forge Cached
+ typing_extensions 4.12.2 pyha770c72_1 conda-forge Cached
+ platformdirs 4.3.6 pyhd8ed1ab_1 conda-forge Cached
+ packaging 24.2 pyhd8ed1ab_2 conda-forge Cached
+ fasteners 0.19 pyhd8ed1ab_1 conda-forge Cached
+ asciitree 0.3.3 py_2 conda-forge Cached
+ locket 1.0.0 pyhd8ed1ab_0 conda-forge Cached
+ ansicolors 1.1.8 pyhd8ed1ab_0 conda-forge Cached
+ jedi 0.19.2 pyhd8ed1ab_1 conda-forge Cached
+ pexpect 4.9.0 pyhd8ed1ab_1 conda-forge Cached
+ prompt-toolkit 3.0.50 pyha770c72_0 conda-forge Cached
+ stack_data 0.6.3 pyhd8ed1ab_1 conda-forge Cached
+ cached-property 1.5.2 hd8ed1ab_1 conda-forge Cached
+ gitdb 4.0.12 pyhd8ed1ab_0 conda-forge Cached
+ h2 4.1.0 pyhd8ed1ab_1 conda-forge Cached
+ markdown-it-py 3.0.0 pyhd8ed1ab_1 conda-forge Cached
+ lazy_import 0.2.2 pyhd8ed1ab_1 conda-forge Cached
+ python-dateutil 2.9.0.post0 pyhff2d567_1 conda-forge Cached
+ tqdm 4.67.1 pyhd8ed1ab_1 conda-forge Cached
+ beautifulsoup4 4.12.3 pyha770c72_1 conda-forge Cached
+ tinycss2 1.4.0 pyhd8ed1ab_0 conda-forge Cached
+ bleach 6.2.0 pyh29332c3_4 conda-forge Cached
+ importlib_resources 6.5.2 pyhd8ed1ab_0 conda-forge Cached
+ importlib-metadata 8.6.1 pyha770c72_0 conda-forge Cached
+ jupyterlab_pygments 0.3.0 pyhd8ed1ab_2 conda-forge Cached
+ comm 0.2.2 pyhd8ed1ab_1 conda-forge Cached
+ matplotlib-inline 0.1.7 pyhd8ed1ab_1 conda-forge Cached
+ cligj 0.7.2 pyhd8ed1ab_2 conda-forge Cached
+ click-plugins 1.1.1 pyhd8ed1ab_1 conda-forge Cached
+ asgiref 3.8.1 pyhd8ed1ab_1 conda-forge Cached
+ pypdf2 3.0.1 pyhd8ed1ab_1 conda-forge Cached
+ mistune 3.1.1 pyhd8ed1ab_0 conda-forge Cached
+ typing-extensions 4.12.2 hd8ed1ab_1 conda-forge Cached
+ jupyter_core 5.7.2 pyh31011fe_1 conda-forge Cached
+ partd 1.4.2 pyhd8ed1ab_0 conda-forge Cached
+ gitpython 3.1.44 pyhff2d567_0 conda-forge Cached
+ rich 13.9.4 pyhd8ed1ab_1 conda-forge Cached
+ bleach-with-css 6.2.0 h82add2a_4 conda-forge Cached
+ ipython 8.31.0 pyh707e725_0 conda-forge Cached
+ django 5.1.5 pyhd8ed1ab_0 conda-forge Cached
+ async-timeout 4.0.3 pyhd8ed1ab_0 conda-forge Cached
+ flexparser 0.4 pyhd8ed1ab_1 conda-forge Cached
+ flexcache 0.3 pyhd8ed1ab_1 conda-forge Cached
+ pint 0.24.4 pyhd8ed1ab_1 conda-forge Cached
+ simplejson 3.19.3 py310ha75aee5_1 conda-forge Cached
+ ruamel.yaml.clib 0.2.8 py310ha75aee5_1 conda-forge Cached
+ propcache 0.2.1 py310h89163eb_1 conda-forge Cached
+ jsonpointer 3.0.0 py310hff52083_1 conda-forge Cached
+ brotli-python 1.1.0 py310hf71b8c6_2 conda-forge Cached
+ frozenlist 1.5.0 py310h89163eb_1 conda-forge Cached
+ libmambapy 2.0.5 py310h446c2ae_1 conda-forge Cached
+ menuinst 2.2.0 py310hff52083_0 conda-forge Cached
+ frozendict 2.4.6 py310ha75aee5_0 conda-forge Cached
+ pycosat 0.6.6 py310ha75aee5_2 conda-forge Cached
+ unicodedata2 16.0.0 py310ha75aee5_0 conda-forge Cached
+ pyside6 6.7.2 py310hfd10a26_4 conda-forge Cached
+ kiwisolver 1.4.7 py310h3788b33_0 conda-forge Cached
+ pyarrow-core 18.1.0 py310hac404ae_0_cpu conda-forge Cached
+ lz4 4.3.3 py310hb259640_1 conda-forge Cached
+ msgpack-python 1.1.0 py310h3788b33_0 conda-forge Cached
+ pillow 11.1.0 py310h7e6dc6c_0 conda-forge Cached
+ mysqlclient 2.2.4 py310h95656fe_2 conda-forge Cached
+ debugpy 1.8.12 py310hf71b8c6_0 conda-forge Cached
+ psutil 6.1.1 py310ha75aee5_0 conda-forge Cached
+ rpds-py 0.22.3 py310h505e2c1_0 conda-forge Cached
+ tornado 6.4.2 py310ha75aee5_0 conda-forge Cached
+ pyzmq 26.2.0 py310h71f11fc_3 conda-forge Cached
+ markupsafe 3.0.2 py310h89163eb_1 conda-forge Cached
+ pyyaml 6.0.2 py310h89163eb_2 conda-forge Cached
+ numpy 2.2.2 py310hefbff90_0 conda-forge Cached
+ cffi 1.17.1 py310h8deb56e_0 conda-forge Cached
+ pyproj 3.7.0 py310h2e9f774_0 conda-forge Cached
+ cytoolz 1.0.1 py310ha75aee5_0 conda-forge Cached
+ multidict 6.1.0 py310h89163eb_2 conda-forge Cached
+ ruamel.yaml 0.18.10 py310ha75aee5_0 conda-forge Cached
+ fonttools 4.55.8 py310h89163eb_0 conda-forge Cached
+ pyarrow 18.1.0 py310hff52083_0 conda-forge Cached
+ h5py 3.12.1 nompi_py310hacc6608_103 conda-forge Cached
+ contourpy 1.3.1 py310h3788b33_0 conda-forge Cached
+ pyogrio 0.10.0 py310h0aed7a2_1 conda-forge Cached
+ scipy 1.15.1 py310hfa6ec8c_0 conda-forge Cached
+ numcodecs 0.13.1 py310h5eaa309_0 conda-forge Cached
+ shapely 2.0.6 py310had3dfd6_2 conda-forge Cached
+ pandas 2.2.3 py310h5eaa309_1 conda-forge Cached
+ cftime 1.6.4 py310hf462985_1 conda-forge Cached
+ python-eccodes 2.37.0 py310hf462985_0 conda-forge Cached
+ zstandard 0.23.0 py310ha39cb0e_1 conda-forge Cached
+ yarl 1.18.3 py310h89163eb_1 conda-forge Cached
+ matplotlib-base 3.10.0 py310h68603db_0 conda-forge Cached
+ scikit-learn 1.6.1 py310h27f47ee_0 conda-forge Cached
+ fiona 1.10.1 py310h0aed7a2_3 conda-forge Cached
+ netcdf4 1.7.2 nompi_py310h5146f0f_101 conda-forge Cached
+ matplotlib 3.10.0 py310hff52083_0 conda-forge Cached
+ cartopy 0.24.0 py310h5eaa309_0 conda-forge Cached
+ jsonpatch 1.33 pyhd8ed1ab_1 conda-forge Cached
+ aiosignal 1.3.2 pyhd8ed1ab_0 conda-forge Cached
+ referencing 0.36.2 pyh29332c3_0 conda-forge Cached
+ jupyter_client 8.6.3 pyhd8ed1ab_1 conda-forge Cached
+ jinja2 3.1.5 pyhd8ed1ab_0 conda-forge Cached
+ dask-core 2025.1.0 pyhd8ed1ab_0 conda-forge Cached
+ magics-python 1.5.8 pyhd8ed1ab_1 conda-forge Cached
+ snuggs 1.4.7 pyhd8ed1ab_2 conda-forge Cached
+ h5netcdf 1.5.0 pyhd8ed1ab_0 conda-forge Cached
+ zarr 2.18.3 pyhd8ed1ab_1 conda-forge Cached
+ xarray 2025.1.1 pyhd8ed1ab_0 conda-forge Cached
+ geopandas-base 1.0.1 pyha770c72_3 conda-forge Cached
+ conda-package-streaming 0.11.0 pyhd8ed1ab_0 conda-forge Cached
+ urllib3 2.3.0 pyhd8ed1ab_0 conda-forge Cached
+ nc-time-axis 1.4.1 pyhd8ed1ab_1 conda-forge Cached
+ mapclassify 2.8.1 pyhd8ed1ab_1 conda-forge Cached
+ jsonschema-specifications 2024.10.1 pyhd8ed1ab_1 conda-forge Cached
+ ipykernel 6.29.5 pyh3099207_0 conda-forge Cached
+ bokeh 3.6.2 pyhd8ed1ab_1 conda-forge Cached
+ branca 0.8.1 pyhd8ed1ab_0 conda-forge Cached
+ cfgrib 0.9.15.0 pyhd8ed1ab_0 conda-forge Cached
+ cf_xarray 0.10.0 pyhd8ed1ab_2 conda-forge Cached
+ pint-xarray 0.4 pyhd8ed1ab_1 conda-forge Cached
+ requests 2.32.3 pyhd8ed1ab_1 conda-forge Cached
+ distributed 2025.1.0 pyhd8ed1ab_0 conda-forge Cached
+ jsonschema 4.23.0 pyhd8ed1ab_1 conda-forge Cached
+ conda-package-handling 2.4.0 pyh7900ff3_2 conda-forge Cached
+ folium 0.19.4 pyhd8ed1ab_0 conda-forge Cached
+ pooch 1.8.2 pyhd8ed1ab_1 conda-forge Cached
+ python-swiftclient 4.6.0 pyhff2d567_1 conda-forge Cached
+ dask 2025.1.0 pyhd8ed1ab_0 conda-forge Cached
+ nbformat 5.10.4 pyhd8ed1ab_1 conda-forge Cached
+ geopandas 1.0.1 pyhd8ed1ab_3 conda-forge Cached
+ metpy 1.6.3 pyhd8ed1ab_1 conda-forge Cached
+ nbclient 0.10.2 pyhd8ed1ab_0 conda-forge Cached
+ nbconvert-core 7.16.6 pyh29332c3_0 conda-forge Cached
+ nbconvert-pandoc 7.16.6 hed9df3c_0 conda-forge Cached
+ nbconvert 7.16.6 hb482800_0 conda-forge Cached
+ aiohttp 3.9.5 py310h2372a71_0 conda-forge Cached
+ magics 4.15.5 hc87abea_0 conda-forge Cached
+ rasterio 1.4.3 py310hbf83865_0 conda-forge Cached
+ conda 25.1.0 py310hff52083_0 conda-forge Cached
+ cdo 2.4.4 h1f03bf2_2 conda-forge Cached
+ metadata-inspector 2024.10.15 pyhd8ed1ab_1 conda-forge Cached
+ papermill 2.6.0 pyhd8ed1ab_1 conda-forge Cached
+ regionmask 0.12.1 pyhd8ed1ab_0 conda-forge Cached
+ conda-libmamba-solver 25.1.1 pyhd8ed1ab_0 conda-forge Cached
+ freva 2410.0.0 pyhd8ed1ab_1 conda-forge Cached
Summary:
Install: 458 packages
Total download: 0 B
─────────────────────────────────────────────────────────────────────────────────────────────────────────
Looking for: ['python=3.10', 'pip', 'freva', 'git-lfs', 'python-swiftclient', 'cdo', 'conda', 'ipykernel', 'cftime', 'nbconvert', 'mamba', 'cartopy', 'geopandas', 'matplotlib', 'xarray', 'pandas', 'pint', 'pint-xarray', 'papermill', 'metpy', 'nc-time-axis', 'cf_xarray', 'dask', 'regionmask==0.12.1', 'shapely', 'fiona', 'h5netcdf', 'netcdf4', 'zarr']
Preparing transaction: ...working...
done
Verifying transaction: ...working...
done
Executing transaction: ...working...
done
Installing pip dependencies: ...working...
Ran pip subprocess with arguments:
['/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/bin/python', '-m', 'pip', 'install', '-U', '-r', '/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt']
Pip subprocess output:
Collecting git+https://gitlab.dkrz.de/ch1187/plugins4freva/climpact.git (from -r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4))
Cloning https://gitlab.dkrz.de/ch1187/plugins4freva/climpact.git to /tmp/pip-req-build-2yf7udt2
Resolved https://gitlab.dkrz.de/ch1187/plugins4freva/climpact.git to commit 6616ee30b20cd386eed7e772a330152fea334348
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Processing /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: setuptools in ./plugin_env/lib/python3.10/site-packages (from -r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 1)) (75.8.0)
Requirement already satisfied: wheel in ./plugin_env/lib/python3.10/site-packages (from -r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 2)) (0.45.1)
Requirement already satisfied: asciitree in ./plugin_env/lib/python3.10/site-packages (from -r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 3)) (0.3.3)
Requirement already satisfied: appdirs in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (1.4.4)
Requirement already satisfied: geopandas in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (1.0.1)
Requirement already satisfied: regionmask in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (0.12.1)
Requirement already satisfied: xarray in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (2025.1.1)
Requirement already satisfied: cf_xarray in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (0.10.0)
Requirement already satisfied: cftime in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (1.6.4)
Requirement already satisfied: cartopy in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (0.24.0)
Requirement already satisfied: nc-time-axis in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (1.4.1)
Requirement already satisfied: h5netcdf in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (1.5.0)
Requirement already satisfied: pint in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (0.24.4)
Requirement already satisfied: pint-xarray in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (0.4)
Requirement already satisfied: python-swiftclient in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (4.6.0)
Collecting swiftspec (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4))
Using cached swiftspec-0.0.4-py3-none-any.whl.metadata (3.1 kB)
Requirement already satisfied: zarr in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (2.18.3)
Requirement already satisfied: tqdm in ./plugin_env/lib/python3.10/site-packages (from climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (4.67.1)
Requirement already satisfied: toml in ./plugin_env/lib/python3.10/site-packages (from heat2urbanimpact==0+untagged.36.g72e1958->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 5)) (0.10.2)
Requirement already satisfied: numpy in ./plugin_env/lib/python3.10/site-packages (from heat2urbanimpact==0+untagged.36.g72e1958->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 5)) (2.2.2)
Requirement already satisfied: matplotlib>=3.6 in ./plugin_env/lib/python3.10/site-packages (from cartopy->climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (3.10.0)
Requirement already satisfied: shapely>=1.8 in ./plugin_env/lib/python3.10/site-packages (from cartopy->climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (2.0.6)
Requirement already satisfied: packaging>=21 in ./plugin_env/lib/python3.10/site-packages (from cartopy->climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (24.2)
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Requirement already satisfied: requests>=2.4.0 in ./plugin_env/lib/python3.10/site-packages (from python-swiftclient->climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (2.32.3)
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Requirement already satisfied: fsspec>=0.9.0 in ./plugin_env/lib/python3.10/site-packages (from swiftspec->climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (2024.12.0)
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Requirement already satisfied: six>=1.5 in ./plugin_env/lib/python3.10/site-packages (from python-dateutil>=2.7->matplotlib>=3.6->cartopy->climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (1.17.0)
Requirement already satisfied: propcache>=0.2.0 in ./plugin_env/lib/python3.10/site-packages (from yarl<2.0,>=1.0->aiohttp->swiftspec->climpact==0+untagged.162.g6616ee3->-r /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/condaenv.3yz1c5oq.requirements.txt (line 4)) (0.2.1)
Using cached swiftspec-0.0.4-py3-none-any.whl (7.4 kB)
Building wheels for collected packages: climpact, heat2urbanimpact
Building wheel for climpact (pyproject.toml): started
Building wheel for climpact (pyproject.toml): finished with status 'done'
Created wheel for climpact: filename=climpact-0+untagged.162.g6616ee3-py3-none-any.whl size=43951 sha256=9c063d7de345f10485b27a3a0718d700ac527154e456faa286fd360f4e063b53
Stored in directory: /tmp/pip-ephem-wheel-cache-o97rhcqh/wheels/01/e4/44/0367ab5d7d4e3b588dbf7aaab707c892002e05c172991f0fdf
Building wheel for heat2urbanimpact (pyproject.toml): started
Building wheel for heat2urbanimpact (pyproject.toml): finished with status 'done'
Created wheel for heat2urbanimpact: filename=heat2urbanimpact-0+untagged.36.g72e1958-py3-none-any.whl size=25061 sha256=d4ea9f6b44244092a0e9973d0263353ad700bad282b9779e2276c3519763ae22
Stored in directory: /tmp/pip-ephem-wheel-cache-o97rhcqh/wheels/1f/72/36/d736baf0da891c8bcd69435fdc7728031314702e91ce31ae72
Successfully built climpact heat2urbanimpact
Installing collected packages: heat2urbanimpact, swiftspec, climpact
Successfully installed climpact-0+untagged.162.g6616ee3 heat2urbanimpact-0+untagged.36.g72e1958 swiftspec-0.0.4
done
#
# To activate this environment, use
#
# $ conda activate /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env
#
# To deactivate an active environment, use
#
# $ conda deactivate
Retrieving notices: ...working... done
echo /home/b/b380001/freva/bin:/home/b/b380001/freva/envs/gnu-r/bin:/sw/bin:/sw/spack-workplace/spack/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/puppetlabs/bin
/home/b/b380001/freva/bin:/home/b/b380001/freva/envs/gnu-r/bin:/sw/bin:/sw/spack-workplace/spack/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/puppetlabs/bin
[32;1m$ export EVALUATION_SYSTEM_PLUGINS=$CI_PROJECT_DIR,wrapper[0;m
[32;1m$ freva-plugin --list[0;m
┏━━━━━━━━━━━━━━━━━━━━━━━━━━━━━┳━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━┓
┃ Tool ┃ Description ┃
┡━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╇━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━┩
│ Animator │ Animate data on lon/lat grids │
│ Blocking_2D │ Calculates various 2D-Blocking Indices of the │
│ │ Northern Hemisphere │
│ ClimDexCalc2 │ Calculates the ET-SCI climate extreme indices │
│ │ (former ClimpactSCI) │
│ Climpact │ Process climate model data for input of impact │
│ │ model │
│ CWT │ Calculate Circulation Weather Type by mean sea │
│ │ level pressure. │
│ DiffPlotter │ Plots difference between two NetCDF files │
│ Heat2UrbanImpact_DO_NOT_USE │ ATTENTION: THIS PLUGIN IS LOCATED HERE ONLY │
│ │ FOR DEVELOPMENT PURPOSES. PLEASE DON'T USE IT │
│ │ FOR THE RESEARCH AIMS. Preprocessed time │
│ │ series of heat periods from RCM data for urban │
│ │ impact models. │
│ HWMID │ Heat wave evaluation using Heat Wave Magnitude │
│ │ Index daily │
│ IDF │ Estimate and plot Intensity-Duration-Frequency │
│ │ relationships │
│ PERCENTILE │ Calculates multiple percentiles using CDO │
│ PET │ Calculation of daily Potential │
│ │ Evatransporation │
│ PreProc │ Spatio-temporal Pre-Processing of Data, │
│ │ including database linking. │
│ PSI │ Calculate Precipitation Severity Index. │
│ WTRACK │ Wind tracking algorithm. │
│ ZYKPAK │ Cyclone tracking and identification package - │
│ │ applied to sea-level pressure -> psl │
└─────────────────────────────┴────────────────────────────────────────────────┘
[32;1m$ freva-plugin heat2urbanimpact_do_not_use region=Hamburg experiment=ssp245-gwl2k models=ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1 output_units=true output_file_type=nc mask_type=none mask_method=centres plot_map=true pre_process_function=pre_proc caption="Heat2UrbanImpact production test from CI piepline https://gitlab.dkrz.de/ch1187/plugins4freva/heat2urbanimpact/-/jobs/$CI_JOB_ID" -vvv[0;m
[12:00:24] DEBUG freva - DEBUG - Loading 'animator'
DEBUG freva - DEBUG - Loading 'climpact'
DEBUG freva - DEBUG - Loading 'climdexcalc2'
DEBUG freva - DEBUG - Loading 'blocking'
DEBUG freva - DEBUG - Loading 'diffplotter'
DEBUG freva - DEBUG - Loading 'idf'
DEBUG freva - DEBUG - Loading 'percentile'
DEBUG freva - DEBUG - Loading 'preproc'
DEBUG freva - DEBUG - Loading 'psi'
DEBUG freva - DEBUG - Loading 'wtrack'
DEBUG freva - DEBUG - Loading 'zykpak'
DEBUG freva - DEBUG - Loading 'cwt'
DEBUG freva - DEBUG - Loading 'hwmid'
DEBUG freva - DEBUG - Loading 'pet'
DEBUG freva - DEBUG - Running heat2urbanimpact_do_not_use with
configuration: defaultdict(<class 'list'>, {'region':
'Hamburg', 'experiment': 'ssp245-gwl2k', 'models':
['ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc
-nukleus-x2yn2-v1'], 'output_units': 'true',
'output_file_type': 'nc', 'mask_type': 'none',
'mask_method': 'centres', 'plot_map': True,
'pre_process_function': 'pre_proc', 'length_of_event': 3,
'event': '95th percentile', 'months_of_event': 'July',
'debug': True})
DEBUG freva - DEBUG - Running heat2urbanimpact_do_not_use with
{'shape_file': None, 'region': 'Hamburg', 'split_by': None,
'experiment': 'ssp245-gwl2k', 'models':
['ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc
-nukleus-x2yn2-v1'], 'event': '95th percentile',
'length_of_event': 3, 'months_of_event': 'July',
'impact_model': None, 'start': None, 'end': None,
'output_units': 'true', 'output_file_type': 'nc',
'mask_type': 'none', 'mask_method': 'centres', 'plot_map':
True, 'pre_process_module': None, 'pre_process_function':
'pre_proc', 'extra_scheduler_options': '', 'debug': True}
[12:00:25] DEBUG freva - DEBUG - Searching dictionary: {'time': '',
'variable': ['tas', 'ta300', 'ta500', 'ta700', 'ta950'],
'experiment': 'ssp245-gwl2k', 'model':
'ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-
nukleus-x2yn2-v1', 'time_frequency': '1hr', 'product':
'ceu-3', 'project': 'nukleus', 'time_select': 'Intersects'}
DEBUG freva - DEBUG - {'variable': ['tas', 'ta300', 'ta500',
'ta700', 'ta950'], 'experiment': 'ssp245-gwl2k', 'model':
'ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-
nukleus-x2yn2-v1', 'time_frequency': '1hr', 'product':
'ceu-3', 'project': 'nukleus', 'facet.limit': -1, 'q':
'*:*'}
DEBUG freva - DEBUG - [('fq', 'variable:tas OR variable:ta300 OR
variable:ta500 OR variable:ta700 OR variable:ta950'), ('fq',
'experiment:ssp245-gwl2k'), ('fq',
'model:ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6
-5-rc-nukleus-x2yn2-v1'), ('fq', 'time_frequency:1hr'),
('fq', 'product:ceu-3'), ('fq', 'project:nukleus'),
('facet.limit', -1), ('q', '*:*')]
DEBUG freva - DEBUG -
http://regiklim-solr.dkrz.de:8983/solr/latest/select?facet=t
rue&rows=0&fq=variable%3Atas+OR+variable%3Ata300+OR+variable
%3Ata500+OR+variable%3Ata700+OR+variable%3Ata950&fq=experime
nt%3Assp245-gwl2k&fq=model%3Aec-earth-consortium-ec-earth3-v
eg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1&fq=time_frequen
cy%3A1hr&fq=product%3Aceu-3&fq=project%3Anukleus&facet.limit
=-1&q=%2A%3A%2A&facet=true&facet.sort=index&facet.mincount=1
&facet.field=ensemble&wt=json
DEBUG freva - DEBUG - {'variable': ['tas', 'ta300', 'ta500',
'ta700', 'ta950'], 'experiment': 'ssp245-gwl2k', 'model':
'ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-
nukleus-x2yn2-v1', 'time_frequency': '1hr', 'product':
'ceu-3', 'project': 'nukleus', 'ensemble': 'r1i1p1f1', 'q':
'*:*', 'fl': 'file', 'sort': 'file desc'}
DEBUG freva - DEBUG - [('fq', 'variable:tas OR variable:ta300 OR
variable:ta500 OR variable:ta700 OR variable:ta950'), ('fq',
'experiment:ssp245-gwl2k'), ('fq',
'model:ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6
-5-rc-nukleus-x2yn2-v1'), ('fq', 'time_frequency:1hr'),
('fq', 'product:ceu-3'), ('fq', 'project:nukleus'), ('fq',
'ensemble:r1i1p1f1'), ('q', '*:*'), ('fl', 'file'), ('sort',
'file desc')]
DEBUG freva - DEBUG - {'variable': ['tas', 'ta300', 'ta500',
'ta700', 'ta950'], 'experiment': 'ssp245-gwl2k', 'model':
'ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-
nukleus-x2yn2-v1', 'time_frequency': '1hr', 'product':
'ceu-3', 'project': 'nukleus', 'ensemble': 'r1i1p1f1', 'q':
'*:*', 'fl': 'file', 'sort': 'file desc'}
DEBUG freva - DEBUG - [('fq', 'variable:tas OR variable:ta300 OR
variable:ta500 OR variable:ta700 OR variable:ta950'), ('fq',
'experiment:ssp245-gwl2k'), ('fq',
'model:ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6
-5-rc-nukleus-x2yn2-v1'), ('fq', 'time_frequency:1hr'),
('fq', 'product:ceu-3'), ('fq', 'project:nukleus'), ('fq',
'ensemble:r1i1p1f1'), ('q', '*:*'), ('fl', 'file'), ('sort',
'file desc')]
DEBUG freva - DEBUG -
http://regiklim-solr.dkrz.de:8983/solr/latest/select?facet=t
rue&rows=0&fq=variable%3Atas+OR+variable%3Ata300+OR+variable
%3Ata500+OR+variable%3Ata700+OR+variable%3Ata950&fq=experime
nt%3Assp245-gwl2k&fq=model%3Aec-earth-consortium-ec-earth3-v
eg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1&fq=time_frequen
cy%3A1hr&fq=product%3Aceu-3&fq=project%3Anukleus&fq=ensemble
%3Ar1i1p1f1&q=%2A%3A%2A&fl=file&sort=file+desc&wt=json
DEBUG freva - DEBUG -
http://regiklim-solr.dkrz.de:8983/solr/latest/select?start=0
&rows=150&fq=variable%3Atas+OR+variable%3Ata300+OR+variable%
3Ata500+OR+variable%3Ata700+OR+variable%3Ata950&fq=experimen
t%3Assp245-gwl2k&fq=model%3Aec-earth-consortium-ec-earth3-ve
g-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1&fq=time_frequenc
y%3A1hr&fq=product%3Aceu-3&fq=project%3Anukleus&fq=ensemble%
3Ar1i1p1f1&q=%2A%3A%2A&fl=file&sort=file+desc&wt=json
DEBUG freva - DEBUG - Loading configuration file from:
/work/ch1187/freva-regiklim/freva/evaluation_system.conf
DEBUG freva - DEBUG - Configuration loaded from
/work/ch1187/freva-regiklim/freva/evaluation_system.conf
DEBUG freva - DEBUG - Calling:
/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva
/heat2urbanimpact/plugin_env/bin/python -B
/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva
/heat2urbanimpact/builder.py /tmp/tmp1zplx55q.json
ERROR 1: PROJ: proj_create_from_database: Open of /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/share/proj failed
traitlets-INFO - Removing existing kernelspec in /home/k/k202187/.local/share/jupyter/kernels/heat2urbanimpact
traitlets-INFO - Installed kernelspec heat2urbanimpact in /home/k/k202187/.local/share/jupyter/kernels/heat2urbanimpact
Heat2UrbanImpact-DEBUG - {'shape_file': '/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/assets/GER.shp', 'region': '129', 'split_by': '', 'experiment': 'ssp245-gwl2k', 'event': '95th percentile', 'length_of_event': 3, 'months_of_event': 'July', 'impact_model': '', 'start': '', 'end': '', 'output_file_type': 'nc', 'mask_method': 'centres', 'plot_map': True, 'pre_process_module': '', 'pre_process_function': 'pre_proc', 'debug': True, 'project': 'nukleus', 'product': 'ceu-3', 'time_frequency': '1hr', 'variable': ['tas', 'ta300', 'ta500', 'ta700', 'ta950'], 'output_dir': PosixPath('/work/ch1187/regiklim-work/k202187/regiklim-ces/output/heat2urbanimpact_do_not_use/6915'), 'output_units': {'true': ''}, 'mask': '', 'account': 'ch1187', 'files': {'ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1': {'r1i1p1f1': 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'/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_203601010000-203612312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_203701010000-203712312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_203801010000-203812312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_203901010000-203912312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204001010000-204012312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204101010000-204112312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204201010000-204212312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204301010000-204312312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204401010000-204412312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204501010000-204512312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204601010000-204612312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204701010000-204712312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204801010000-204812312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_204901010000-204912312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_205001010000-205012312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_205101010000-205112312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_205201010000-205212312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_205301010000-205312312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_205401010000-205412312300.nc', '/work/ch1187/freva-regiklim/data/model/regional/nukleus-btu/NUKLEUS/output/CEU-3/CLMcom-BTU/EC-Earth-Consortium-EC-Earth3-Veg/ssp245-GWL2K/r1i1p1f1/CLMcom-BTU-ICON-2-6-5-rc/nukleus-x2yn2-v1/1hr/tas/v20240201/tas_CEU-3_EC-Earth-Consortium-EC-Earth3-Veg_ssp245-GWL2K_r1i1p1f1_CLMcom-BTU-ICON-2-6-5-rc_nukleus-x2yn2-v1_1hr_205501010000-205512312300.nc']}}, 'kernel_name': 'heat2urbanimpact', 'abort_on_error': True}
Heat2UrbanImpact-INFO - Reading netcdf files
pint.util-WARNING - Redefining 'degrees_north' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degrees_N' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degreesN' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degree_north' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degree_N' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degreeN' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degrees_east' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degrees_E' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degreesE' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degree_east' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degree_E' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'degreeE' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
pint.util-WARNING - Redefining 'gpm' (<class 'pint.delegates.txt_defparser.plain.UnitDefinition'>)
/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/lib/python3.10/site-packages/climpact/run_directory.py:93: FutureWarning: The ``method`` argument is internal and will be removed in the future. Setting the ``method`` (i.e. backend) should not be necessary. Please raise an issue if you require it.
mask = regionmask.mask_geopandas(
/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/lib/python3.10/site-packages/climpact/run_directory.py:456: FutureWarning: The return type of `Dataset.dims` will be changed to return a set of dimension names in future, in order to be more consistent with `DataArray.dims`. To access a mapping from dimension names to lengths, please use `Dataset.sizes`.
np.ones((dims[dset_dims[0]], dims[dset_dims[1]]))
/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/lib/python3.10/site-packages/climpact/run_directory.py:93: FutureWarning: The ``method`` argument is internal and will be removed in the future. Setting the ``method`` (i.e. backend) should not be necessary. Please raise an issue if you require it.
mask = regionmask.mask_geopandas(
/scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/assets/preproc.py:11: FutureWarning: The return type of `Dataset.dims` will be changed to return a set of dimension names in future, in order to be more consistent with `DataArray.dims`. To access a mapping from dimension names to lengths, please use `Dataset.sizes`.
dims = [d for d in dset.dims.keys() if "lat" in d or "lon" in d]
Heat2UrbanImpact-INFO - Writing time-series data - 1 files
Heat2UrbanImpact-INFO - data file: /scratch/k/k202187/tmpy_0xgfqx/k202187/ProcessedModelData-nukleus-ceu-3-tas_ta300_ta500_ta700_ta950-20250130_120229T.zip
Heat2UrbanImpact-INFO - 1 of 1 saved (100.0%)
Heat2UrbanImpact-INFO - Uploading data to swift object store
climpact.swift-INFO - k202187/ProcessedModelData-nukleus-ceu-3-tas_ta300_ta500_ta700_ta950-20250130_120229T.zip
papermill-INFO - Input Notebook: /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/assets/PostPorcessing.ipynb
papermill-INFO - Output Notebook: /work/ch1187/regiklim-work/k202187/regiklim-ces/output/heat2urbanimpact_do_not_use/6915/PostPorcessing.ipynb
papermill-INFO - Working directory: /work/ch1187/regiklim-work/k202187/regiklim-ces/output/heat2urbanimpact_do_not_use/6915
papermill-WARNING - Passed unknown parameter: data_file
papermill-INFO - Executing notebook with kernel: heat2urbanimpact
papermill-INFO - Executing Cell 1---------------------------------------
papermill-INFO - Ending Cell 1------------------------------------------
papermill-INFO - Executing Cell 2---------------------------------------
ERROR 1: PROJ: proj_create_from_database: Open of /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/share/proj failed
papermill-WARNING - ERROR 1: PROJ: proj_create_from_database: Open of /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/share/proj failed
ERROR 1: PROJ: proj_create_from_database: Open of /scratch/hpc-ci/k202187/static/00604442/ch1187/plugins4freva/heat2urbanimpact/plugin_env/share/proj failed
papermill-INFO - Ending Cell 2------------------------------------------
papermill-INFO - Executing Cell 3---------------------------------------
papermill-INFO - Ending Cell 3------------------------------------------
papermill-INFO - Executing Cell 4---------------------------------------
papermill-INFO - Ending Cell 4------------------------------------------
papermill-INFO - Executing Cell 5---------------------------------------
papermill-INFO - Ending Cell 5------------------------------------------
papermill-INFO - Executing Cell 6---------------------------------------
papermill-WARNING -
Downloading: 0%| | 0.00/10.5M [00:00<?, ?B/s]
Downloading: 0%| | 0.00/10.5M [00:00<?, ?B/s]papermill-WARNING -
Downloading: 100%|██████████| 10.5M/10.5M [00:00<00:00, 170MB/s]
Downloading: 100%|██████████| 10.5M/10.5M [00:00<00:00, 170MB/s]papermill-WARNING -
papermill-INFO - model name
index
0 ec-earth-consortium-ec-earth3-veg-clmcom-btu-i...
papermill-INFO - Ending Cell 6------------------------------------------
papermill-INFO - Executing Cell 7---------------------------------------
papermill-INFO - Ending Cell 7------------------------------------------
papermill-INFO - Executing Cell 8---------------------------------------
papermill-INFO - ['ta300', 'ta500', 'ta700', 'ta950', 'tas']
papermill-INFO - Ending Cell 8------------------------------------------
papermill-INFO - Executing Cell 9---------------------------------------
papermill-INFO - <xarray.DataArray 'ta300' (time: 262968)> Size: 2MB
[262968 values with dtype=float64]
Coordinates:
* time (time) datetime64[ns] 2MB 2026-01-01 ... 2055-12-31T23:00:00
plev float64 8B ...
height float64 8B ...
Attributes:
standard_name: air_temperature
long_name: Air Temperature
units: K
grid_mapping: rotated_pole
cell_methods: time: point
papermill-INFO - Ending Cell 9------------------------------------------
papermill-INFO - Executing Cell 10--------------------------------------
papermill-INFO - [<matplotlib.lines.Line2D at 0x7ffb5e0319c0>]
papermill-INFO - <Figure size 640x480 with 1 Axes>
papermill-INFO - Ending Cell 10-----------------------------------------
Heat2UrbanImpact-INFO - A notebook for post-processing is ready at /work/ch1187/regiklim-work/k202187/regiklim-ces/output/heat2urbanimpact_do_not_use/6915/PostPorcessing.ipynb
Heat2UrbanImpact-INFO - Data was uploaded. To access the data use the url: https://swift.dkrz.de/v1/dkrz_3d3c7abc-1681-4012-b656-3cc1058c52a9/heat2urbanimpact/k202187/ProcessedModelData-nukleus-ceu-3-tas_ta300_ta500_ta700_ta950-20250130_120229T.zip
[12:46:10] DEBUG freva - DEBUG - Converting....
[12:46:11] DEBUG freva - DEBUG - finished
DEBUG freva - DEBUG - Storing results into data base....
DEBUG freva - DEBUG - finished
DEBUG freva - DEBUG - Arguments: {'region': 'Hamburg',
'experiment': 'ssp245-gwl2k', 'models':
'ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-
nukleus-x2yn2-v1', 'output_units': 'true',
'output_file_type': 'nc', 'mask_type': 'none',
'mask_method': 'centres', 'plot_map': 'true',
'pre_process_function': 'pre_proc'}
DEBUG freva - DEBUG - Current configuration:
{
"region": "Hamburg",
"experiment": "ssp245-gwl2k",
"models": [
"ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2
-6-5-rc-nukleus-x2yn2-v1"
],
"output_units": "true",
"output_file_type": "nc",
"mask_type": "none",
"mask_method": "centres",
"plot_map": true,
"pre_process_function": "pre_proc",
"length_of_event": 3,
"event": "95th percentile",
"months_of_event": "July",
"debug": true
}
[32;1m$ mkdir -p build/prod_test[0;m
[32;1m$ REGIKLIM_JOB_ID=$(ls -t /work/$ACCOUNT/regiklim-work/$GITLAB_USER_LOGIN/regiklim-ces/output/heat2urbanimpact_do_not_use/ | head -n 1)[0;m
[32;1m$ cd /work/$ACCOUNT/regiklim-work/$GITLAB_USER_LOGIN/regiklim-ces/output/heat2urbanimpact_do_not_use/$REGIKLIM_JOB_ID[0;m
[32;1m$ echo "<!DOCTYPE html><html><head>" >> index.html[0;m
[32;1m$ echo "<meta http-equiv=\"refresh\" content=\"0; url=https://www-regiklim.dkrz.de/history/$REGIKLIM_JOB_ID/results/\">" >> index.html[0;m
[32;1m$ echo "<title>Redirecting...</title>" >> index.html[0;m
[32;1m$ echo "</head><body>" >> index.html[0;m
[32;1m$ echo "<p>If you are not redirected, <a href=\"https://www-regiklim.dkrz.de/history/$REGIKLIM_JOB_ID/results/\">click here</a>.</p>" >> index.html[0;m
[32;1m$ echo "</body></html>" >> index.html[0;m
[32;1m$ ls -la[0;m
total 746
drwxr-xr-x 2 k202187 ch1187 4096 Jan 30 12:46 .
drwxr-sr-x 9 k202187 ch1187 4096 Jan 30 12:00 ..
-rw-r--r-- 1 k202187 k20200 1124 Jan 30 12:46 01A_Information.html
-rw-r--r-- 1 k202187 k20200 294 Jan 30 12:46 index.html
-rwxr-xr-x 1 k202187 ch1187 147733 Jan 30 12:02 MapPlot_ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1_r1i1p1f1_ssp245-gwl2k_1hr_all_ta300.png
-rwxr-xr-x 1 k202187 ch1187 149552 Jan 30 12:02 MapPlot_ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1_r1i1p1f1_ssp245-gwl2k_1hr_all_ta500.png
-rwxr-xr-x 1 k202187 ch1187 147812 Jan 30 12:02 MapPlot_ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1_r1i1p1f1_ssp245-gwl2k_1hr_all_ta700.png
-rwxr-xr-x 1 k202187 ch1187 148884 Jan 30 12:02 MapPlot_ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1_r1i1p1f1_ssp245-gwl2k_1hr_all_ta950.png
-rwxr-xr-x 1 k202187 ch1187 146455 Jan 30 12:02 MapPlot_ec-earth-consortium-ec-earth3-veg-clmcom-btu-icon-2-6-5-rc-nukleus-x2yn2-v1_r1i1p1f1_ssp245-gwl2k_1hr_all_tas.png
-rwxr-xr-x 1 k202187 ch1187 85609 Jan 30 12:46 PostPorcessing.ipynb
[32;1m$ cp -r * $CI_PROJECT_DIR/build/prod_test[0;m
[32;1mSlurm job ci-604442_1738233124 state: COMPLETED[0;m
section_end:1738237620:step_script
[0Ksection_start:1738237620:archive_cache
[0K[0K[36;1mSaving cache for successful job[0;m[0;m
[32;1mCreating cache default-non_protected...[0;m
Runtime platform [0;m arch[0;m=amd64 os[0;m=linux pid[0;m=1917405 revision[0;m=690ce25c version[0;m=17.8.3
.cache/pip: found 136 matching artifact files and directories[0;m
No URL provided, cache will not be uploaded to shared cache server. Cache will be stored only locally.[0;m
[32;1mCreated cache[0;m
section_end:1738237622:archive_cache
[0Ksection_start:1738237622:upload_artifacts_on_success
[0K[0K[36;1mUploading artifacts for successful job[0;m[0;m
[32;1mUploading artifacts...[0;m
Runtime platform [0;m arch[0;m=amd64 os[0;m=linux pid[0;m=1917500 revision[0;m=690ce25c version[0;m=17.8.3
build/prod_test: found 9 matching artifact files and directories[0;m
Uploading artifacts as "archive" to coordinator... 201 Created[0;m id[0;m=604442 responseStatus[0;m=201 Created token[0;m=glcbt-64
section_end:1738237623:upload_artifacts_on_success
[0Ksection_start:1738237623:cleanup_file_variables
[0K[0K[36;1mCleaning up project directory and file based variables[0;m[0;m
section_end:1738237623:cleanup_file_variables
[0K[32;1mJob succeeded[0;m